Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3267g00044 ATGGGCCATCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGTCTGTGGTCTCCTGAAGAAGATGACAAGCTCGTCAAATTCATTACCACTCATGGCCATAAAAGTTGGAGTTCTGTTCCTAAACTTGCAGGGTTGCAGAGATGTGGGAAAAGTTGCAGACTGAGATGGATAAACTATCTGAGACCTGATCTCAAGAGAGGTTCCTTCACTGCCGATGAAGAACAAACCATTCTCGACGTTCATCGAATTCTCGGAAACAGATGGGCTCAGATAGCTAAGCATCTACCGGGAAGAACAGACAACGAGGTGAAGAATTTCTGGAACTCATGCATTAAGAAGAAACTCATTTCTCAGGGCTTTGACCCTCAGACTCACAATCTCCTCTCTTCTCACAGACGACCCTCTCTTTCTGTTTCTTCCTCTTCTGCCACTAACAATGATCATAACAATGATTCCACTTTCAAACTGGTTCATGAACCTGAAAACATGAATCTTCAACAACCTTGTACCTCCACCGTCTTCTCCATCCAATACCAACGACCCAATTCGACCAGCACTAATAATCATAATGTCTCTAACAGTGATAATGTTGTCCATGAACCTCATAATTTCCCCTTTGAATCATCCATTATTAATGGGAATATTCCTGCGCCCAACTTTTCTTCGTCCTCTTCTGCCTGCATCAAGAACAACAACTATAATGATTGCTCATTATCTTCCCTTGTTGGGTTTTCTGAGAATATTGACCACAGATCATCATCATCATCATCATTGTGGGTTTCTCGGGATGATATTGCTGAAACTGACCAGATCTTGAGATCAGCTCAGACATTAATGCAAGGAGATATTACTGAAGCACAGTTGGAACAAGAGAAGGAGAAGAGCAGTACTAATAATATAGACCAAGTCAGAGAGGAGGACCATTTTAATAATAATAATAGTAACTGTTTGGAAGGGTCAAGCAATAACTTTGATTTTGGGTTGTTGGAAGGTGTACTTAACTCTGAATATATGTCTTATGACGTCCTCTCCTCCATGGATGATCTTGCATGGAACTTTTAG 1062 0.4124 MGHRCCSKQKIKRGLWSPEEDDKLVKFITTHGHKSWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFTADEEQTILDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGFDPQTHNLLSSHRRPSLSVSSSSATNNDHNNDSTFKLVHEPENMNLQQPCTSTVFSIQYQRPNSTSTNNHNVSNSDNVVHEPHNFPFESSIINGNIPAPNFSSSSSACIKNNNYNDCSLSSLVGFSENIDHRSSSSSSLWVSRDDIAETDQILRSAQTLMQGDITEAQLEQEKEKSSTNNIDQVREEDHFNNNNSNCLEGSSNNFDFGLLEGVLNSEYMSYDVLSSMDDLAWNF 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3267g00044 353 SMART sant 65 113 IPR001005 -
Pral3267g00044 353 SMART sant 12 62 IPR001005 -
Pral3267g00044 353 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Pral3267g00044 353 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Pral3267g00044 353 CDD SANT 68 108 IPR001005 -
Pral3267g00044 353 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Pral3267g00044 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Pral3267g00044 353 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Pral3267g00044 353 FunFam MYB transcription factor 5 65 - -
Pral3267g00044 353 Gene3D - 10 66 - -
Pral3267g00044 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Pral3267g00044 353 CDD SANT 16 60 IPR001005 -
Pral3267g00044 353 Gene3D - 67 149 - -
Pral3267g00044 353 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Pral3267g00044 353 MobiDBLite consensus disorder prediction 126 149 - -
Pral3267g00044 353 FunFam Transcription factor MYB86 67 145 - -
Pral3267g00044 353 PANTHER MYB DOMAIN PROTEIN 55 1 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3267g00044 Pral-Chr3267 430453 432696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3267g00044 1 133 MYB Transcription Factor Family AT3G12720 84.211 1.81e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral3267g00044 Myb_DNA-binding 3.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3267g00044 K09422 - gmx:100811532 310.457