Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3267g00002 ATGGCAGCTGTTAAGGGAAAATCTAAAGTGGGTTTAACCCAGGTCTTTGAAGATGGCCAAGCTTGTAAAAATGTGGACCGTAGAAATTTTAAGGTTTTATCGGACATCGAGCATCTCAAAATAGGCGATGAAGAGCTCAAAAAAACTGCAACAGAAGCCAGTGTGCATGCAAGAAGGAGTGCTTTGGTAGCTAACAGAGGGTGTATCTTGAATACTGCCAATAATTCAAAGGGCGGCTTCATAAGTATGAAGAAAAGCAGTGGCATATACGGCAGTTCTGCAAATATGAAAGCGAGAAAGGCATTGGCTGATGTTAGCAATATTCAAGGCAACTCTTCCAGGAACATTAAACAGGATGCTTCTAAAATGAAGGTTTTAGCCAGTACAGGCAGCAAGTTAAGCGATGCCTCTTCAAGGAGGTCCCTTACGGGGAGACTGCAAAGGAATATAAGTCAAGTTGAAGTTCAGTTAGATGCTTCCAAGAGAGTAGGCACTAGTTCAATGGCACCCTTAGGTGCTCAGAAGATTAATAAAAATGGCGGAAGATCATCTGTTGCAACTGAGGGCAGGACTGTGAGGAAGTCTATCTTACCAACAGTGACAAGGAGGTCTTTACCAGCGCCAAGGGGGGTCAATAAGGAAGACATGAGCAACATAAAGGGTAATGCTAGAAGTTCTGATACTGCAGAGAAAATAAGCAGAATACCAAACAAGGCAGAAACAGTGAGAAAAGTTGGCCCCCAATTATCTAGTGCAAGAAGCCATCTAAGGAAGACTCGAGCGACCGATGGCCATGTTCATATTAATCCGGGAGCCAGGGTTAAAACCAATGTTTTACATACGTCCTCAAGGAAGTCCATCAAGCCTCTTGTAAAGACCACACTTAAGGCTTCTAACGCTACAAGGACTTCAAAATCTAAGTCCAAATCAGCTGCTGCAATTTCATCACAGGATGATAAAACAGTTGCGTTGTCTCTCCATGAGAATAATTTACCTCTGGTTTCCAATGAGGCAAATGAAAGGGAGCTTCCATCTGTTGGAGACAGCAACTCCAGAAAAAATTCGTTAGAGATAATTGGAAGGAAAAAGTCCACCCGTCGGAAATCTTATACGACTTTGTTACTGGAAAGATCTAAGGCTCAAACTTCGGCTCTGGCAAATTACATGTCAATTCAGACAGACATTACACCTCATATGCGGGGCATATTAATAAACTGGTTAATTGAAGTGCACTTGAAATTTGAGTTGATGCCGGAAACCCTGTATCTCACCGTTTCATTATTGGATCAATATCTATCTCTAGTGACAATTAAAAAGAATGAATTGCAGTTAGTTGGTCTTACTGCACTTTTGCTGGCCTCAAAATATGAGGATTTTTGGCATCCTCCGGTCAACGATTTGACAAGCATTTCAGTTGAATCATATACAAGAGAACAAATGCTTTTAATGGAGAAGCTTATTCTTAGAAAGTTGAAGTTCCGTCTTAATGGCCCCACTCCTTATGTTTTCATGGTGAGGTTTTTGAAGGCTGCTCAGTCAGACAAGAAGCTGGAACATTTGGCATTCTGTCTCATTGAACTGTGCCTAGTTGAATATGAAGCCTTGGCATTCAAGTCTTCGCTGCTATGTGCATCCGCAATCTATGTTGCTCGCTGCACCCTGCAAATTAACCCCCCGTGGACTCCGTTGCTTCAGAAACATGCTCGTTATGAAGTCTCCCAATTAAGGGATTGTGCAGAGATGATATTGAAGTTCCATAAATCAGCTAGAACAGGAAAGCTCATGGTTACATATGAAAAATATTCAAGGCCTGAACTCAGTGGTGTTGCAGCCCTGAAACCGTTGGACAGCCTTCCTCTGATTTGA 1866 0.4218 MAAVKGKSKVGLTQVFEDGQACKNVDRRNFKVLSDIEHLKIGDEELKKTATEASVHARRSALVANRGCILNTANNSKGGFISMKKSSGIYGSSANMKARKALADVSNIQGNSSRNIKQDASKMKVLASTGSKLSDASSRRSLTGRLQRNISQVEVQLDASKRVGTSSMAPLGAQKINKNGGRSSVATEGRTVRKSILPTVTRRSLPAPRGVNKEDMSNIKGNARSSDTAEKISRIPNKAETVRKVGPQLSSARSHLRKTRATDGHVHINPGARVKTNVLHTSSRKSIKPLVKTTLKASNATRTSKSKSKSAAAISSQDDKTVALSLHENNLPLVSNEANERELPSVGDSNSRKNSLEIIGRKKSTRRKSYTTLLLERSKAQTSALANYMSIQTDITPHMRGILINWLIEVHLKFELMPETLYLTVSLLDQYLSLVTIKKNELQLVGLTALLLASKYEDFWHPPVNDLTSISVESYTREQMLLMEKLILRKLKFRLNGPTPYVFMVRFLKAAQSDKKLEHLAFCLIELCLVEYEALAFKSSLLCASAIYVARCTLQINPPWTPLLQKHARYEVSQLRDCAEMILKFHKSARTGKLMVTYEKYSRPELSGVAALKPLDSLPLI 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3267g00002 621 SUPERFAMILY Cyclin-like 498 618 IPR036915 -
Pral3267g00002 621 MobiDBLite consensus disorder prediction 297 319 - -
Pral3267g00002 621 Pfam Cyclin, N-terminal domain 376 496 IPR006671 -
Pral3267g00002 621 MobiDBLite consensus disorder prediction 202 231 - -
Pral3267g00002 621 Pfam Cyclin, C-terminal domain 498 613 IPR004367 -
Pral3267g00002 621 CDD CYCLIN_AtCycB-like_rpt2 498 614 - -
Pral3267g00002 621 Gene3D - 491 619 - -
Pral3267g00002 621 FunFam Cyclin N-terminal domain containing 2 385 493 - -
Pral3267g00002 621 SUPERFAMILY Cyclin-like 373 496 IPR036915 -
Pral3267g00002 621 CDD CYCLIN_CCNB1-like_rpt1 387 493 - -
Pral3267g00002 621 PANTHER CYCLINS 337 601 IPR039361 -
Pral3267g00002 621 SMART cyclin_7 405 489 IPR013763 -
Pral3267g00002 621 SMART cyclin_7 502 584 IPR013763 -
Pral3267g00002 621 Gene3D - 384 490 - -
Pral3267g00002 621 FunFam putative cyclin-B3-1 isoform X3 494 619 - -
Pral3267g00002 621 SMART Cyclin_C_2 498 615 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3267g00002 Pral-Chr3267 19899 26504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3267g00002 25 620 Core Cell Cycle Gene Families AT1G16330 44.733 1.05e-136 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3267g00002 K21777 - gmx:100808850 613.224