Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3265g00009 ATGGATCAATCGGAGCAGGCACAACAGCAGCCGCAAAATCATGCAGCAGGAGTTGCTGCCGGCCCTGGCCAGATGGCCTATTCTACTCACTACCAGACTGCTCCCATGGTAGCTTCTGGAACACCTGCTGTAACTATACCTTCCTCAGCACAGCCTCCAGCCCCGTTCTCAAATTCCCCTCACCAAATTGCTTACCAGCAAGCACATCATTTCCACCATCAAAAGCAGCAGCAGCAGCAACAGCAGCTTCAGATTTTTTGGGCTGACCAACTGCGAGAAATTGAGCAAACGACTGACTTCAAGAATCACAGTCTTCCACTTGCTAGGATAAAGAAAATAATGAAAGCTGATGAGGATGTCCGGATGATTTCAGCAGAGGCCCCAGTCATATTTGCGAAAGCATGTGAAATGTTTATCCTGGAGTTGACTCTGCGCTCATGGATCCACACAGAAGAAAACAAGAGGAGAACACTGCAGAAGAATGATATAGCTGCTGCAATTTCAAGGACTGACGTATTCGATTTCTTGGTTGACATTATCCCAAGAGATGAGTTGAAAGAAGAGGGGCTTGGAGTAACAAAAGCTACAATTCCGGTTGTAGGTTCCCCAACTGATATGCCATATTATTATGTCCCACCACAGCATCCTGTAGGACATACTGGGATGATCATGGGAAAACTAGTTGACCAGGCAGCACTATATGCTTCACAGCAGCCTCGACCTCATATGTCTTTTATGCCGTGGCCTCAAACACAACCATCACAACAGCCACCGCCACCTGATCAGCAACAAACAGACACTTGA 804 0.4714 MDQSEQAQQQPQNHAAGVAAGPGQMAYSTHYQTAPMVASGTPAVTIPSSAQPPAPFSNSPHQIAYQQAHHFHHQKQQQQQQQLQIFWADQLREIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKATIPVVGSPTDMPYYYVPPQHPVGHTGMIMGKLVDQAALYASQQPRPHMSFMPWPQTQPSQQPPPPDQQQTDT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3265g00009 267 MobiDBLite consensus disorder prediction 1 15 - -
Pral3265g00009 267 SUPERFAMILY Histone-fold 61 176 IPR009072 GO:0046982
Pral3265g00009 267 MobiDBLite consensus disorder prediction 1 20 - -
Pral3265g00009 267 Pfam Core histone H2A/H2B/H3/H4 60 167 IPR007125 GO:0003677
Pral3265g00009 267 Gene3D Histone, subunit A 65 182 IPR009072 GO:0046982
Pral3265g00009 267 FunFam Nuclear transcription factor Y subunit gamma 70 182 - -
Pral3265g00009 267 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 60 242 - -
Pral3265g00009 267 MobiDBLite consensus disorder prediction 240 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3265g00009 Pral-Chr3265 49626 52465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3265g00009 83 219 CCAAT-HAP5 Transcription Factor Family AT1G56170 86.232 1.20e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral3265g00009 Histone 9.9e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3265g00009 K08066 - cave:132175957 372.089