Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3265g00006 ATGATGGAACAACCTGGAATGCAGAAACAGCAACAGTACAATAGCATGGAACCTAGAAATGAGGAACTCCATTCTGCACCACAGTCTACTGTGCAGGACCGTCTGGAAGGCATGCGTGTCAATATGAGGCCTGCTGACCGTAATATGTCAGATAAGAAACCTGTACTTAATTACTCCATTCAGACTGGTGAGGAATTTGCTCTTGAATTTATGCGAGATAGAGTGAATCTCAGGCAGCCTGTCTTTCCAAATATCGTGGGTGATCCCAATTATGCAACAGGTTATATGGAATTGAAGGGTATTTTAGGCATTAGTCATTCAGGATCTGAAAGTGGCTCAGATATTTCTATGCTCCCAAAAGTTGAAAAAGGTCCCAAAGAATTTGACAGAAGAAGCTCTTCTATGCAGCGGGACAGAAGCAATTATGTGTCAGTTCGATCAATCCCTAGAACTTCATCTAATCAAGAAAATAACCGAGTCCTTCATGGTCTTGCTTCGTCTGGAGCTTCTACTGGCTCATCAATGAAGATGAAGGTTCTTTGTAGTTTTGGTGGTAGAATATTGCCACGCCCCAGTGATGGAAAGCTTAGATATGTTGGAGGTGAAACACGTATTATATGTATCAGAAAGGACATAAGTTGGCAGGAGCTTATGCAGAAAGCCTTATCACTCTATCATGAAACTCATGCTATAAAGTATCAGCTCCCTGGGGAAGATCTTGATGCCTTGGTTTCTGTATCTAGTGAGGAGGATCTGCGAAATATGATGGAAGAATGCCGTGATCTAGAAAATAGAGAAGGATCACAAAAACTTAGGATGTTTCTGTTTTCCATGATTGATATGGATGATCCTAGTGTTGATGGTGATACGGAAATCCAGTATGTGGTGGCTGTTAATGGCATGGACTTGGGATCAAGGAACCATTCAGCCCTTCATGTTGCAAGCGCTTTTGCTGATAATTTACAAGAACTAGATGGACATAATATTGAGAGGGAGGCCAGTAGAACTCAGATGGAATCAACTGGAGCTACTAGTTCTTCCTTGGCTGCCAATGTTAACTCGTCATTGGGAATTCAGTTTTCGCAACCAATGATTCCAACTGCCTCAAGTGCTTATGAAAGCAATCTGTTGTTTCATAGTAGCCATCATGAGGAAACGAGTCAATATCCAGTGCACTATGGTGTTGATTCTTCTAACAACTCAGCTTTTAGACATATTCCAGCTTCTGCGCCTACACATGTTCCTAACAATCAAGGAATTATCAATGAAGGGCATCCACCTGATGTGTTGCAAGTAACAAATCCAGAAATGCCACCAATGCAGGTAAAGAAAAGGGTTGATGGTTCCATTAAGCATGAAAGTGACTCTGGAAAAGGCTTATCCTCAGAAACACCATATCCTGTTCCTTCACAACCATTTGATGGAAATTTACCGGGTAATTTTTCTGAAGTACCAGTTACAAACGCTGTACCAGGGGTGCACCAACATAAATTGCCTTCAAAAAGCAAGGGCAAGCACCAGCATTATGAAGAGGCCTTCTCATTGGTGAATACAGCAAATTCCCCACAGATTCCAAAGTCTGGTGAAGATGACCTCTGTTCTACCTCTACTAATGCTTTCAATCCTTCTTATGTTGATTCTGGCTCCAATGTTGTTGATTTGAGCTGCCTTGAGCCTCCTGCACTTCCCAACAGAGTCTATTATTCAGAGAGAATCCCTAGAGAGCAGGCAGATTTGCTGAACCGATCCACAAAGTCAGATGATTTACATGGTTCTCAGGCTCTCGTGTCTGATCTACTCTCTGACTTCAACCAACAGAATTCAACTACAGAATCAAGTGATAAGTTACAGGCTGGAAATCTGTCAAATCTGACGGCAGTGTCAAGCATGACAGCAAAACCATTGAATCCAAATGGCCATGCCCTTGGCAATGGGCTTGCCCAGCTACAAAATCAAAAACAATTGTCAGATGCAAACAACACAGATTATAAAGTTGCTGCAAATGAAGATCGGGTCCTTAGATCTGAAAATGAAACCAATTTATCCAGAGACAATCATAGCAATTACATAGTTGATGAAACCAACAGCACTGACCATCCTCCATTTCACAAGGTTCCATCTGACCGTAATTTGGGTGATGCTTCTAACAAAGAATCCAGCAATGATGCTAAGATTCAACCACAGCCCTTTGCTTTAGCTGGGAACATGAGCCAAGATGTTTCTCAAGGTTTACCCTCAGATGCTGTTTCCGTGCCTGCTCAGGGTGATATTATGATTGATATTGATGACAGGTTTCCTCGCGATTTCCTTTATGATATGTTCTCCAAGGCAGTACTCTCTGAAGATTCCTCACGTATTAGCCCATTCCCAACAGATGGAACAGGTTTAAGCTTATATGTGGAAAATCATGACCCAAAAAGTTGGTCATATTTTCAGAAGTTGGCAAATGAAGGGTTTGATAATGTGTCTTTAATTGATCAAGATCATCCAGGTTTTTCATCTGCATTGAGAAAAATGCAAGAAGAAGATAGTAGATCTCGGCAAGTTGCACCCCTGCCAGCTGATGGAGTTTCAGGAGGCGGTGATTTTGGTAAAGAAAATCAGAAAAATTTGCCTGTAACAACTAGAACAGAGGCCACTGTTCTGCATCCAAACTATGATCAAACCCAAGTTAGTGAGACTGAAAGCAAGAATTTGGATCCAGTAAAGGGAAACACAAGAGTAAAAGACTCTGAATATGAGGATCGCAAGAATGAAGCAGGGAATCTTGGTCATCTGCATGATCGTTCTTTGGAGGATATTGACATCAGTACTTTGCAGCTCATAAATAATGAAGATCTTGAAGAGCTGAAAGAATTGGGTTCAGGAACCTTTGGGACTGTATACCATGGAAAATGGAGGGGAACGGATGTTGCCATTAAAAGAATAAAGAAAAGTTGCTTCACTGGTAGATCTTCAGAACAAGAGAGACTGACTGTAGAGTTTTGGCGGGAAGCTGACATACTATCCAAGCTTCATCACCCAAATGTGGTAGCATTTTATGGTGTAGTACAGGACGGGCCTGGAGGAACATTAGCTACTGTTACTGAGTTCATGGTAGATGGTTCTCTAAGGCATGTTTTGCTTCGTAAGGATAGGTATCTAGATCGCCGCAAGAGGCTGATAATAGCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGATTTGAAATGTGACAATTTGCTCGTGAACTTAAAGGATCCTTTGCGGCCAATATGCAAGGTTGGTGATTTTGGCCTTTCAAAAATTAAACGAAATACCCTGGTTTCTGGTGGCGTGCGTGGAACTCTACCTTGGATGGCACCTGAGCTCTTGAATGGCAGCAGCAACAAAGTCTCAGAGAAGGTTGATGTATTCTCGTTTGGCATTGTATTATGGGAGATTCTTACCGGTGAAGAACCATATGCTAATATGCACTATGGCGCAATTATAGGAGGCATTGTAAATAACACATTAAGGCCAACAATCCCCGGTTATTGCGATCCTGAGTGGCGGCAACTAATGGAGCAGTGTTGGGCACCTAACCCCGCAGCCAGGCCATCATTCACAGAAATTGCTCGTCGCTTAAGGGTGATGTCTGCAGCTGCTGGTCAGACCAAAGGGCAAGGCTATAGGGCATCTAAATGA 3690 0.4222 MMEQPGMQKQQQYNSMEPRNEELHSAPQSTVQDRLEGMRVNMRPADRNMSDKKPVLNYSIQTGEEFALEFMRDRVNLRQPVFPNIVGDPNYATGYMELKGILGISHSGSESGSDISMLPKVEKGPKEFDRRSSSMQRDRSNYVSVRSIPRTSSNQENNRVLHGLASSGASTGSSMKMKVLCSFGGRILPRPSDGKLRYVGGETRIICIRKDISWQELMQKALSLYHETHAIKYQLPGEDLDALVSVSSEEDLRNMMEECRDLENREGSQKLRMFLFSMIDMDDPSVDGDTEIQYVVAVNGMDLGSRNHSALHVASAFADNLQELDGHNIEREASRTQMESTGATSSSLAANVNSSLGIQFSQPMIPTASSAYESNLLFHSSHHEETSQYPVHYGVDSSNNSAFRHIPASAPTHVPNNQGIINEGHPPDVLQVTNPEMPPMQVKKRVDGSIKHESDSGKGLSSETPYPVPSQPFDGNLPGNFSEVPVTNAVPGVHQHKLPSKSKGKHQHYEEAFSLVNTANSPQIPKSGEDDLCSTSTNAFNPSYVDSGSNVVDLSCLEPPALPNRVYYSERIPREQADLLNRSTKSDDLHGSQALVSDLLSDFNQQNSTTESSDKLQAGNLSNLTAVSSMTAKPLNPNGHALGNGLAQLQNQKQLSDANNTDYKVAANEDRVLRSENETNLSRDNHSNYIVDETNSTDHPPFHKVPSDRNLGDASNKESSNDAKIQPQPFALAGNMSQDVSQGLPSDAVSVPAQGDIMIDIDDRFPRDFLYDMFSKAVLSEDSSRISPFPTDGTGLSLYVENHDPKSWSYFQKLANEGFDNVSLIDQDHPGFSSALRKMQEEDSRSRQVAPLPADGVSGGGDFGKENQKNLPVTTRTEATVLHPNYDQTQVSETESKNLDPVKGNTRVKDSEYEDRKNEAGNLGHLHDRSLEDIDISTLQLINNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPGYCDPEWRQLMEQCWAPNPAARPSFTEIARRLRVMSAAAGQTKGQGYRASK 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3265g00006 1229 ProSiteProfiles Protein kinase domain profile. 947 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3265g00006 1229 Gene3D Transferase(Phosphotransferase) domain 1 1035 1226 - -
Pral3265g00006 1229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1072 1084 IPR008271 GO:0004672|GO:0006468
Pral3265g00006 1229 CDD STKc_MAP3K-like 953 1210 - -
Pral3265g00006 1229 PRINTS Tyrosine kinase catalytic domain signature 1066 1084 IPR001245 GO:0004672|GO:0006468
Pral3265g00006 1229 PRINTS Tyrosine kinase catalytic domain signature 1181 1203 IPR001245 GO:0004672|GO:0006468
Pral3265g00006 1229 PRINTS Tyrosine kinase catalytic domain signature 1029 1042 IPR001245 GO:0004672|GO:0006468
Pral3265g00006 1229 PRINTS Tyrosine kinase catalytic domain signature 1137 1159 IPR001245 GO:0004672|GO:0006468
Pral3265g00006 1229 SUPERFAMILY Protein kinase-like (PK-like) 939 1209 IPR011009 -
Pral3265g00006 1229 ProSitePatterns Protein kinases ATP-binding region signature. 953 978 IPR017441 GO:0005524
Pral3265g00006 1229 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1035 1227 - -
Pral3265g00006 1229 Pfam PB1 domain 193 276 IPR000270 GO:0005515
Pral3265g00006 1229 MobiDBLite consensus disorder prediction 900 924 - -
Pral3265g00006 1229 Coils Coil 245 265 - -
Pral3265g00006 1229 CDD PB1_UP2 180 276 - -
Pral3265g00006 1229 MobiDBLite consensus disorder prediction 839 870 - -
Pral3265g00006 1229 Gene3D Phosphorylase Kinase; domain 1 940 1034 - -
Pral3265g00006 1229 MobiDBLite consensus disorder prediction 692 723 - -
Pral3265g00006 1229 Pfam Protein tyrosine and serine/threonine kinase 948 1210 IPR001245 GO:0004672|GO:0006468
Pral3265g00006 1229 SMART PB1_new 191 278 IPR000270 GO:0005515
Pral3265g00006 1229 PANTHER SERINE-THREONINE PROTEIN KINASE 230 1211 - -
Pral3265g00006 1229 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 196 278 - -
Pral3265g00006 1229 Gene3D - 195 278 - -
Pral3265g00006 1229 SMART serkin_6 947 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3265g00006 1229 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 940 1034 - -
Pral3265g00006 1229 MobiDBLite consensus disorder prediction 1 34 - -
Pral3265g00006 1229 MobiDBLite consensus disorder prediction 443 466 - -
Pral3265g00006 1229 MobiDBLite consensus disorder prediction 889 924 - -
Pral3265g00006 1229 MobiDBLite consensus disorder prediction 109 143 - -
Pral3265g00006 1229 SUPERFAMILY CAD & PB1 domains 192 277 - -
Pral3265g00006 1229 MobiDBLite consensus disorder prediction 120 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3265g00006 Pral-Chr3265 35804 43098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3265g00006 14 1139 MAP Kinase Kinase Kinase AT1G79570 45.477 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pral3265g00006 PK_Tyr_Ser-Thr 2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3265g00006 - - gmx:100799118 1576.22