Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3265g00005 ATGATGGAACAACCTGGAATGCAGAAACAGCAACAGTACAATAGCATGGAACCTAGAAATGAGGAACTCCATTCTGCACCACAGTCTACTGTGCAGGACCGTCTGGAAGGCATGCGTGTCAATATGAGGCCTGCTGACCGTAATATGTCAGATAAGAAACCTGTACTTAATTACTCCATTCAGACTGGTGAGGAATTTGCTCTTGAATTTATGCGAGATAGAGTGAATCTCAGGCAGCCTGTCTTTCCAAATATCGTGGGTGATCCCAATTATGCAACAGGTTATATGGAATTGAAGGGTATTTTAGGCATTAGTCATTCAGGATCTGAAAGTGGCTCAGATATTTCTATGCTCCCAAAAGTTGAAAAAGGTCCCAAAGAATTTGACAGAAGAAGCTCTTCTATGCAGCGGGACAGAAGCAATTATGTGTCAGTTCGATCAATCCCTAGAACTTCATCTAATCAAGAAAATAACCGAGTCCTTCATGGTCTTGCTTCGTCTGGAGCTTCTACTGGCTCATCAATGAAGATGAAGGTTCTTTGTAGTTTTGGTGGTAGAATATTGCCACGCCCCAGTGATGGAAAGCTTAGATATGTTGGAGGTGAAACACGTATTATATGTATCAGAAAGGACATAAGTTGGCAGGAGCTTATGCAGAAAGCCTTATCACTCTATCATGAAACTCATGCTATAAAGTATCAGCTCCCTGGGGAAGATCTTGATGCCTTGGTTTCTGTATCTAGTGAGGAGGATCTGCGAAATATGATGGAAGAATGCCGTGATCTAGAAAATAGAGAAGGATCACAAAAACTTAGGATGTTTCTGTTTTCCATGATTGATATGGATGATCCTAGTGTTGATGGTGATACGGAAATCCAGTATGTGGTGGCTGTTAATGGCATGGACTTGGGATCAAGGAACCATTCAGCCCTTCATGTTGCAAGCGCTTTTGCTGATAATTTACAAGAACTAGATGGACATAATATTGAGAGGGAGGCCAGTAGAACTCAGATGGAATCAACTGGAGCTACTAGTTCTTCCTTGGCTGCCAATGTTAACTCGTCATTGGGAATTCAGTTTTCGCAACCAATGATTCCAACTGCCTCAAGTGCTTATGAAAGCAATCTGTTGTTTCATAGTAGCCATCATGAGGAAACGAGTCAATATCCAGTGCACTATGGTGTTGATTCTTCTAACAACTCAGCTTTTAGACATATTCCAGCTTCTGCGCCTACACATGTTCCTAACAATCAAGGAATTATCAATGAAGGGCATCCACCTGATGTGTTGCAAGTAACAAATCCAGAAATGCCACCAATGCAGGTAAAGAAAAGGGTTGATGGTTCCATTAAGCATGAAAGTGACTCTGGAAAAGGCTTATCCTCAGAAACACCATATCCTGTTCCTTCACAACCATTTGATGGAAATTTACCGGGTAATTTTTCTGAAGTACCAGTTACAAACGCTGTACCAGGGGTGCACCAACATAAATTGCCTTCAAAAAGCAAGGGCAAGCACCAGCATTATGAAGAGGCCTTCTCATTGGTGAATACAGCAAATTCCCCACAGATTCCAAAGTCTGGTGAAGATGACCTCTGTTCTACCTCTACTAATGCTTTCAATCCTTCTTATGTTGATTCTGGCTCCAATGTTGTTGATTTGAGCTGCCTTGAGCCTCCTGCACTTCCCAACAGAGTCTATTATTCAGAGAGAATCCCTAGAGAGCAGGCAGATTTGCTGAACCGATCCACAAAGTCAGATGATTTACATGGTTCTCAGGCTCTCGTGTCTGATCTACTCTCTGACTTCAACCAACAGAATTCAACTACAGAATCAAGTGATAAGTTACAGGCTGGAAATCTGTCAAATCTGACGGCAGTGTCAAGCATGACAGCAAAACCATTGAATCCAAATGGCCATGCCCTTGGCAATGGGCTTGCCCAGCTACAAAATCAAAAACAATTGTCAGATGCAAACAACACAGATTATAAAGTTGCTGCAAATGAAGATCGGGTCCTTAGATCTGAAAATGAAACCAATTTATCCAGAGACAATCATAGCAATTACATAGTTGATGAAACCAACAGCACTGACCATCCTCCATTTCACAAGGTTCCATCTGACCGTAATTTGGGTGATGCTTCTAACAAAGAATCCAGCAATGATGCTAAGATTCAACCACAGCCCTTTGCTTTAGCTGGGAACATGAGCCAAGATGTTTCTCAAGGTTTACCCTCAGATGCTGTTTCCGTGCCTGCTCAGGGTGATATTATGATTGATATTGATGACAGGTTTCCTCGCGATTTCCTTTATGATATGTTCTCCAAGGCAGTACTCTCTGAAGATTCCTCACGTATTAGCCCATTCCCAACAGATGGAACAGGTTTAAGCTTATATGTGGAAAATCATGACCCAAAAAGTTGGTCATATTTTCAGAAGTTGGCAAATGAAGGGTTTGATAATGTGTCTTTAATTGATCAAGATCATCCAGGTTTTTCATCTGCATTGAGAAAAATGCAAGAAGAAGATAGTAGATCTCGGCAAGTTGCACCCCTGCCAGCTGATGGAGTTTCAGGAGGCGGTGATTTTGGTAAAGAAAATCAGAAAAATTTGCCTGTAACAACTAGAACAGAGGCCACTGTTCTGCATCCAAACTATGATCAAACCCAAGTTAGTGAGACTGAAAGCAAGAATTTGGATCCAGTAAAGGGAAACACAAGAGTAAAAGACTCTGAATATGAGGATCGCAAGAATGAAGCAGGGAATCTTGGTCATCTGCATGATCGTTCTTTGGAGGATATTGACATCAGTACTTTGCAGCAGCTCATAAATAATGAAGATCTTGAAGAGCTGAAAGAATTGGGTTCAGGAACCTTTGGGACTGTATACCATGGAAAATGGAGGGGAACGGATGTTGCCATTAAAAGAATAAAGAAAAGTTGCTTCACTGGTAGATCTTCAGAACAAGAGAGACTGACTGTAGAGTTTTGGCGGGAAGCTGACATACTATCCAAGCTTCATCACCCAAATGTGGTAGCATTTTATGGTGTAGTACAGGACGGGCCTGGAGGAACATTAGCTACTGTTACTGAGTTCATGGTAGATGGTTCTCTAAGGCATGTTTTGCTTCGTAAGGATAGGTATCTAGATCGCCGCAAGAGGCTGATAATAGCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGATTTGAAATGTGACAATTTGCTCGTGAACTTAAAGGATCCTTTGCGGCCAATATGCAAGGTTGGTGATTTTGGCCTTTCAAAAATTAAACGAAATACCCTGGTTTCTGGTGGCGTGCGTGGAACTCTACCTTGGATGGCACCTGAGCTCTTGAATGGCAGCAGCAACAAAGTCTCAGAGAAGGTTGATGTATTCTCGTTTGGCATTGTATTATGGGAGATTCTTACCGGTGAAGAACCATATGCTAATATGCACTATGGCGCAATTATAGGAGGCATTGTAAATAACACATTAAGGCCAACAATCCCCGGTTATTGCGATCCTGAGTGGCGGCAACTAATGGAGCAGTGTTGGGCACCTAACCCCGCAGCCAGGCCATCATTCACAGAAATTGCTCGTCGCTTAAGGGTGATGTCTGCAGCTGCTGGTCAGACCAAAGGGCAAGGCTATAGGGCATCTAAATGA 3693 0.4224 MMEQPGMQKQQQYNSMEPRNEELHSAPQSTVQDRLEGMRVNMRPADRNMSDKKPVLNYSIQTGEEFALEFMRDRVNLRQPVFPNIVGDPNYATGYMELKGILGISHSGSESGSDISMLPKVEKGPKEFDRRSSSMQRDRSNYVSVRSIPRTSSNQENNRVLHGLASSGASTGSSMKMKVLCSFGGRILPRPSDGKLRYVGGETRIICIRKDISWQELMQKALSLYHETHAIKYQLPGEDLDALVSVSSEEDLRNMMEECRDLENREGSQKLRMFLFSMIDMDDPSVDGDTEIQYVVAVNGMDLGSRNHSALHVASAFADNLQELDGHNIEREASRTQMESTGATSSSLAANVNSSLGIQFSQPMIPTASSAYESNLLFHSSHHEETSQYPVHYGVDSSNNSAFRHIPASAPTHVPNNQGIINEGHPPDVLQVTNPEMPPMQVKKRVDGSIKHESDSGKGLSSETPYPVPSQPFDGNLPGNFSEVPVTNAVPGVHQHKLPSKSKGKHQHYEEAFSLVNTANSPQIPKSGEDDLCSTSTNAFNPSYVDSGSNVVDLSCLEPPALPNRVYYSERIPREQADLLNRSTKSDDLHGSQALVSDLLSDFNQQNSTTESSDKLQAGNLSNLTAVSSMTAKPLNPNGHALGNGLAQLQNQKQLSDANNTDYKVAANEDRVLRSENETNLSRDNHSNYIVDETNSTDHPPFHKVPSDRNLGDASNKESSNDAKIQPQPFALAGNMSQDVSQGLPSDAVSVPAQGDIMIDIDDRFPRDFLYDMFSKAVLSEDSSRISPFPTDGTGLSLYVENHDPKSWSYFQKLANEGFDNVSLIDQDHPGFSSALRKMQEEDSRSRQVAPLPADGVSGGGDFGKENQKNLPVTTRTEATVLHPNYDQTQVSETESKNLDPVKGNTRVKDSEYEDRKNEAGNLGHLHDRSLEDIDISTLQQLINNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPGYCDPEWRQLMEQCWAPNPAARPSFTEIARRLRVMSAAAGQTKGQGYRASK 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3265g00005 1230 SMART serkin_6 948 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3265g00005 1230 ProSiteProfiles Protein kinase domain profile. 948 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3265g00005 1230 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1036 1228 - -
Pral3265g00005 1230 MobiDBLite consensus disorder prediction 900 924 - -
Pral3265g00005 1230 Coils Coil 245 265 - -
Pral3265g00005 1230 PRINTS Tyrosine kinase catalytic domain signature 1030 1043 IPR001245 GO:0004672|GO:0006468
Pral3265g00005 1230 PRINTS Tyrosine kinase catalytic domain signature 1138 1160 IPR001245 GO:0004672|GO:0006468
Pral3265g00005 1230 PRINTS Tyrosine kinase catalytic domain signature 1182 1204 IPR001245 GO:0004672|GO:0006468
Pral3265g00005 1230 PRINTS Tyrosine kinase catalytic domain signature 1067 1085 IPR001245 GO:0004672|GO:0006468
Pral3265g00005 1230 ProSitePatterns Protein kinases ATP-binding region signature. 954 979 IPR017441 GO:0005524
Pral3265g00005 1230 PANTHER SERINE-THREONINE PROTEIN KINASE 228 1212 - -
Pral3265g00005 1230 CDD PB1_UP2 180 276 - -
Pral3265g00005 1230 MobiDBLite consensus disorder prediction 839 870 - -
Pral3265g00005 1230 SUPERFAMILY Protein kinase-like (PK-like) 936 1210 IPR011009 -
Pral3265g00005 1230 MobiDBLite consensus disorder prediction 692 723 - -
Pral3265g00005 1230 Pfam PB1 domain 193 276 IPR000270 GO:0005515
Pral3265g00005 1230 SMART PB1_new 191 278 IPR000270 GO:0005515
Pral3265g00005 1230 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 196 278 - -
Pral3265g00005 1230 Gene3D Phosphorylase Kinase; domain 1 941 1035 - -
Pral3265g00005 1230 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1073 1085 IPR008271 GO:0004672|GO:0006468
Pral3265g00005 1230 MobiDBLite consensus disorder prediction 1 34 - -
Pral3265g00005 1230 MobiDBLite consensus disorder prediction 443 466 - -
Pral3265g00005 1230 Gene3D - 195 278 - -
Pral3265g00005 1230 MobiDBLite consensus disorder prediction 889 924 - -
Pral3265g00005 1230 MobiDBLite consensus disorder prediction 109 143 - -
Pral3265g00005 1230 Gene3D Transferase(Phosphotransferase) domain 1 1036 1227 - -
Pral3265g00005 1230 Pfam Protein tyrosine and serine/threonine kinase 949 1211 IPR001245 GO:0004672|GO:0006468
Pral3265g00005 1230 CDD STKc_MAP3K-like 954 1211 - -
Pral3265g00005 1230 SUPERFAMILY CAD & PB1 domains 192 277 - -
Pral3265g00005 1230 MobiDBLite consensus disorder prediction 120 136 - -
Pral3265g00005 1230 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 941 1035 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3265g00005 Pral-Chr3265 35804 43098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3265g00005 14 1140 MAP Kinase Kinase Kinase AT1G79570 45.440 0.0 864
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pral3265g00005 PK_Tyr_Ser-Thr 2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3265g00005 - - gmx:100799118 1571.6