Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3265g00004 ATGGACCCTAGATATGATGGCTTCCAGCCTGTTTCACGAACTGTAATGCAGGACCACCTGGATGGGGTGCATGCTGGTAGGGGAGCGTATGCCCCTAATACATCTGAAGTTAAACCTGTACTTAATTATTCCATACAGACTGGTGAGGAGTTTGCACTCGAATTTATGCGTGACAGGGTGAATCTCAGGAAGCCTGTAATTTCCAGTGCTGGTGATCCCAATTCTGCAACAGTTCATAGTAGTCGTGCAGGATGTGAAAGTGGATCAGATATTTCTATGCGTGAAATGGGTGGCAGGGATCCAAAAGAGTATGATGGTAAGGATACATTATTACATGGAGGCAGATGCAATTATGGATCTATTCAATCAATGCCAAGAACTTCATATAATCAGGAAAATGGTCGATTTTTGCATGGGTGTACCTCTTATGGAAGTTCTGATAGCTCATCAATGACAATGAAAGTCCTTTGCAGCTTTGGTGGTAGGATATTACCACGACCTGGTGATGGAAAACTTAGATATGTTGGGGGTGAAACACGCATTATCCGAATAAGAAAGGACATATCTTGGCAGGAGCTTCTGCAGAAATCATTATCAATATATAGCCAAGCTCATGTGATTAAGTATCAGCTTCCCGGGGAAGATCTTGATGCCTTGGTCTCTGTGTCATCTGATGAAGATTTGCAGAATATGATGGAGGAATGTAATCAACCGCAAGATAGAGAAGGATCGCAAAAGCTTAGAATTTTTTTATTCTCAATGAGTGATTTGGATGATGCTCAATTTGGTCTCAGTAGTGTGGGTGATGATTCCGAGGTCCAGTATGTTGTTGCTGTTAATGGCATGGACTTTGGTTCAAGAAACAACTCAGTGCTTCTTGGTGCGAGCTCTTCAGCAAATGATATACGTGAATTGGACAGGCAAAATACTGAGATGGAAGTTGGGAGGGTTCCTGTAGAATCTATAGGTGTTGGCAACACTCCATTGACTGGGAATTATGACTCATCACCAGCCATTCAGTCTTCAAAACCTATGCTTCCAACGTCGTCAAATGCTCATGAACCCTATTCACTCTACAAAGACCAGATGATGCACCTTGGGGAGGCTTTTAGTCAATATCCTATGCACCATGGTCTTGATCCTTCTCAAACCTTTACTTTCATAGAGACTTCTAACGCCATGCCTCCTCATGGGATGATATATCAACAGGGGATTTTGAATGAAGGTTCTCCTAATGGATTAAAAGCACAGAATTCGGAAATACCTGCAATGCTGGTGAAAAAAATGGGTGATAGTTCAGTTCCACAAGATAGTAACCCCGCAAAAGTTCTATCCTCAGAAACACCATCCCCTGTTCCCACACAACCAAAAGATGATTTCTTGAACAATAATGTTAATAAAGCTACGGTTGCAGTTAACATACCTGAGGGGAAACTGCCCACACTGCCATCAATGAAAAAGGAGCAGCAACAGGAGTATAAAGAGGCCCCTTCCACATCAAGCAGTGCATTTGGTCCTGGTAATGTTGATTCTCAATCCAATGGGATTGATTTAAGTTGCCTTCACCCTCCTCCAATGCCTAAAAGAGTTTATTATTCTTATTCTGAAAGAATGCCTAGGGAGCAAGTAGAATTGCTAAATCGGTCTGCAAAGTCGGATGACACGTATGATTCTCAGTTTCCTGTATCAGATTTACTTTCTGACATCAATCCCCTGTATTCAGTCACTGAATCTAGTGACAACTTGCACAATAGAGGTCAGTCTAATTTAACAGAGGATTTAAGTGCCACATCAAAACCACTGTATGTAGATGGCAACATCATTGTTAATGGGCTTAACGAAGTGCAGATGCACAAACTGTCACCTGAGATGAGCGGTCAGATAAGGTCAAAACCCTCAGAACAAGTGGATGTGGAGTTGGAGCAGGTATTATCAAACGATGAAGGAAGTAAAATGGTGGTCAATGAGGATAAGGCCATCGGACCTGAGACTGATATTTATTTTGAAGATAACCACAATAAACCCCTGGTTGATGAAAACAAGAACTTAAAATCAGATTTTCCTGCTTTGGATCAGGCCCTTCCTTTTAAGCACAATGATGGTCCAACATCTCATCTTCCAGAGACTAATCGGGGTCATGGGTCAGGGAAAGAATCGAATGATGATTCTATGGTGCAAGAAGTACCTGTTTCATTGACTGGAAACACAACGGAAGACATTTCTCAAGATTTTACATCAAATGATCTTCCCAAACAAGCACAGGCTGACATTCTTATTGATATCGATGATCGATTTCCTCGCGAATTGCTTTCTGATATGTATACTAAAGCGATACTTGCGGAAGACGCATCTAGTCTGCATCCACTAAATAATATTGGAGTGGGTGTAAGCATAAACCTGGAAAACCATGAACCTAAGTCATGGTCGTATTTTGGGAAATTGGCACGAGAAGGGCTAGATAACATCTCTCTTATTGACCGGGATCCTCTTGGTTTTTCACCTGAACCTGGAAATGTAGATGATAAAACTCACCTTGTCACGCTGCTAACACCTGATGGAATATCTGTAGACCAAGCAGATTTGCATCTCAATTTTGATGGGGAAAGTCAGAAGGGTTTTCATGGAATGATTGGAACAGAAACCTCTTATGTGCAGTCTAACTATGATCATTCCCAAGTGAAGGAGACTGAAAGTATGCAGTTTGATGCCACAGTGGAGAATTCAAGAGGTCAAGAGTCAGAATTTGAGGATGGGAAGTTTGAAACAAGAAATAGTGGTCTACCTCCACTTGATCCTTCTCTGGGAGGTTTTGATATCAGTACCTTACAGGTCATAAAGAATGAAGATCTTGAAGAGCTGAAGGAATTGGGTTCTGGGACCTTTGGAACTGTGTATCATGGAAAATGGCGGGGAACAGATGTTGCCATTAAGAGAATAAAGAAAATCTGTTTCACTGGAAGATCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCTGACATCCTTTCCAAGCTTCATCATCCAAATGTTCTGGCATTCTATGGTGTAGTCCAGGATGGACCAGGGGGGACAATGGCTACTGTTACAGAGTACATGGTGGATGGTTCTCTCAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCCAAGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTAAACTTGAAAGACCCTGTGAGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATCAAACGAAATACATTGGTTTCTGGTGGTGTGCGTGGAACCCTACCTTGGATGGCTCCTGAGCTGCTGAATGGCAGCAGCAACAAAGTCTCAGAAAAGGTTGATGTGTTCTCATTTGGCATAGTATTATGGGAGATTCTGACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATTATAGGTGGGATTGTAAATAACACATTAAGGCCAACAATACCAAGTTCTTGTGATGCTGAGTGGAGGGCACTAATGGAGGAATGTTGGGCACCGAACCCTGCAGCCAGGCCTTCCTTCACAGAAATAGCCAGTCGCTTAAGGGTCATGTCTGCTTCTGCTTCCCAAACCAAATCACAGCCTCACAAGCCAACCAAATGA 3699 0.4234 MDPRYDGFQPVSRTVMQDHLDGVHAGRGAYAPNTSEVKPVLNYSIQTGEEFALEFMRDRVNLRKPVISSAGDPNSATVHSSRAGCESGSDISMREMGGRDPKEYDGKDTLLHGGRCNYGSIQSMPRTSYNQENGRFLHGCTSYGSSDSSSMTMKVLCSFGGRILPRPGDGKLRYVGGETRIIRIRKDISWQELLQKSLSIYSQAHVIKYQLPGEDLDALVSVSSDEDLQNMMEECNQPQDREGSQKLRIFLFSMSDLDDAQFGLSSVGDDSEVQYVVAVNGMDFGSRNNSVLLGASSSANDIRELDRQNTEMEVGRVPVESIGVGNTPLTGNYDSSPAIQSSKPMLPTSSNAHEPYSLYKDQMMHLGEAFSQYPMHHGLDPSQTFTFIETSNAMPPHGMIYQQGILNEGSPNGLKAQNSEIPAMLVKKMGDSSVPQDSNPAKVLSSETPSPVPTQPKDDFLNNNVNKATVAVNIPEGKLPTLPSMKKEQQQEYKEAPSTSSSAFGPGNVDSQSNGIDLSCLHPPPMPKRVYYSYSERMPREQVELLNRSAKSDDTYDSQFPVSDLLSDINPLYSVTESSDNLHNRGQSNLTEDLSATSKPLYVDGNIIVNGLNEVQMHKLSPEMSGQIRSKPSEQVDVELEQVLSNDEGSKMVVNEDKAIGPETDIYFEDNHNKPLVDENKNLKSDFPALDQALPFKHNDGPTSHLPETNRGHGSGKESNDDSMVQEVPVSLTGNTTEDISQDFTSNDLPKQAQADILIDIDDRFPRELLSDMYTKAILAEDASSLHPLNNIGVGVSINLENHEPKSWSYFGKLAREGLDNISLIDRDPLGFSPEPGNVDDKTHLVTLLTPDGISVDQADLHLNFDGESQKGFHGMIGTETSYVQSNYDHSQVKETESMQFDATVENSRGQESEFEDGKFETRNSGLPPLDPSLGGFDISTLQVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREADILSKLHHPNVLAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAKDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPVRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSSCDAEWRALMEECWAPNPAARPSFTEIASRLRVMSASASQTKSQPHKPTK 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3265g00004 1232 MobiDBLite consensus disorder prediction 697 723 - -
Pral3265g00004 1232 Pfam PB1 domain 169 252 IPR000270 GO:0005515
Pral3265g00004 1232 MobiDBLite consensus disorder prediction 494 518 - -
Pral3265g00004 1232 Gene3D - 171 254 - -
Pral3265g00004 1232 SUPERFAMILY CAD & PB1 domains 169 259 - -
Pral3265g00004 1232 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1038 1230 - -
Pral3265g00004 1232 Gene3D Phosphorylase Kinase; domain 1 943 1037 - -
Pral3265g00004 1232 ProSitePatterns Protein kinases ATP-binding region signature. 956 981 IPR017441 GO:0005524
Pral3265g00004 1232 SMART serkin_6 950 1216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3265g00004 1232 PRINTS Tyrosine kinase catalytic domain signature 1069 1087 IPR001245 GO:0004672|GO:0006468
Pral3265g00004 1232 PRINTS Tyrosine kinase catalytic domain signature 1184 1206 IPR001245 GO:0004672|GO:0006468
Pral3265g00004 1232 PRINTS Tyrosine kinase catalytic domain signature 1140 1162 IPR001245 GO:0004672|GO:0006468
Pral3265g00004 1232 PRINTS Tyrosine kinase catalytic domain signature 1032 1045 IPR001245 GO:0004672|GO:0006468
Pral3265g00004 1232 ProSiteProfiles Protein kinase domain profile. 950 1215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3265g00004 1232 MobiDBLite consensus disorder prediction 68 87 - -
Pral3265g00004 1232 SMART PB1_new 167 254 IPR000270 GO:0005515
Pral3265g00004 1232 MobiDBLite consensus disorder prediction 476 522 - -
Pral3265g00004 1232 MobiDBLite consensus disorder prediction 93 108 - -
Pral3265g00004 1232 MobiDBLite consensus disorder prediction 432 462 - -
Pral3265g00004 1232 CDD PB1_UP2 156 252 - -
Pral3265g00004 1232 PANTHER SERINE-THREONINE PROTEIN KINASE 197 1214 - -
Pral3265g00004 1232 MobiDBLite consensus disorder prediction 66 108 - -
Pral3265g00004 1232 CDD STKc_MAP3K-like 956 1213 - -
Pral3265g00004 1232 SUPERFAMILY Protein kinase-like (PK-like) 941 1212 IPR011009 -
Pral3265g00004 1232 MobiDBLite consensus disorder prediction 429 462 - -
Pral3265g00004 1232 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 943 1037 - -
Pral3265g00004 1232 Gene3D Transferase(Phosphotransferase) domain 1 1038 1232 - -
Pral3265g00004 1232 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 172 254 - -
Pral3265g00004 1232 MobiDBLite consensus disorder prediction 906 932 - -
Pral3265g00004 1232 Pfam Protein tyrosine and serine/threonine kinase 951 1213 IPR001245 GO:0004672|GO:0006468
Pral3265g00004 1232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1075 1087 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3265g00004 Pral-Chr3265 24686 33913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3265g00004 32 563 MAP Kinase Kinase Kinase AT1G16270 40.667 5.38e-95 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pral3265g00004 PK_Tyr_Ser-Thr 1.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3265g00004 - - gmx:100799639 1563.51