Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3264g00004 ATGGCGATGCCTCTAAGCACCTATTTCAACTGGGAGGCCTCTGTGCAGCAAACCATGAACAATGATGTCCCAGAAATAATGAGCAGTTACTTTAATTCCTTCTTCCAGCAAGAAACACCACCGCCACCACTACCATTAGTACCAGATTATTCAGATCATGAAAGCTTCTTCTTCCTTAATGATAATAATCCAAACAGTTTATTGTTTGATTATTATTACTCTTTCCCAGAGTTAACCTATTCTCCTCCTCAATATCAAACACCATCATTACCACTCTGTGATTATAACATGAACATCTTCCCGAGTGATGATCAGATTCAGACCTTTCAATATCCCTACCCTAAACGCCAGAAGTTAAGCTTTGAAGACAATCATTATCAGTTACCGTATCATAGGGATAATTATTTCTATGACGGTTTTGAAGATAATAATTACCCTTACTGTTGTTCGTTAATGCCGGAGTTTAATGATATTGGAGTCCCACCACTGCAGCTTCCGGCGCCGGCGAGTGATTACAGTGAGAAGAAATGGTGTGGGGCTGGGGAGGCGACGGCGAGGACGGTGTCGGCGCAGAGCGTGGCGGCGAGAGAAAGGAGGAAGAAGATAGCAGAGAAGACACAGGAGCTGGGGAAGATGGTTCCAGGTGGGTGCAAGATGAACACAGCTGAGATGCTTCTTGCAGCTTCCAAGTATGTTAAGTACCTGCAAGCCCAAGTTTCGATGCTTCAGATTATGAACACACATATGGAAGATAAAGAATCAACTTGGAGTGATAATCAAGATCAGCAATTACAAGCAATGCTTGGCAGTCCCAGTGTTGCAGAGAAGCTCTACTTGCAGGAAAAGTGCCTGGTCCCACAAAACTTGGTCACCACATTGACAAATCACACTGATATCCAAACAAGACCTTCCATTCTCAAAGAACTTCATCAGTTGATCATTGTCACAGACACTGAGAAGGAACAGCTCCAATAA 975 0.4338 MAMPLSTYFNWEASVQQTMNNDVPEIMSSYFNSFFQQETPPPPLPLVPDYSDHESFFFLNDNNPNSLLFDYYYSFPELTYSPPQYQTPSLPLCDYNMNIFPSDDQIQTFQYPYPKRQKLSFEDNHYQLPYHRDNYFYDGFEDNNYPYCCSLMPEFNDIGVPPLQLPAPASDYSEKKWCGAGEATARTVSAQSVAARERRKKIAEKTQELGKMVPGGCKMNTAEMLLAASKYVKYLQAQVSMLQIMNTHMEDKESTWSDNQDQQLQAMLGSPSVAEKLYLQEKCLVPQNLVTTLTNHTDIQTRPSILKELHQLIIVTDTEKEQLQ 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3264g00004 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 186 235 IPR011598 GO:0046983
Pral3264g00004 324 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 191 293 IPR045843 GO:0003700|GO:0006355
Pral3264g00004 324 SMART finulus 192 241 IPR011598 GO:0046983
Pral3264g00004 324 Gene3D - 185 260 IPR036638 GO:0046983
Pral3264g00004 324 Pfam Helix-loop-helix DNA-binding domain 194 236 IPR011598 GO:0046983
Pral3264g00004 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 248 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3264g00004 Pral-Chr3264 14890 17091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3264g00004 32 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 35.192 5.28e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral3264g00004 HLH 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3264g00004 - - pcin:129316727 445.662