Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3263g00017 ATGGCGATGCCTCTAAGCACCTATTTCAACTGGGAGGCCTCTGTGCAGCAAACCATGAACAATGATGTCCCAGAAATAATGAGCAGTTACTTTAATTCCTTCTTCCAGCAAGAAACACCACCGCCACCACTACCATTAGTACCAGATTATTCAGATCATGAAAGCTTCTTCTTCCTTGATGATAATAATCCAAACAGTTTATTGTTTGATTATTATTACTCTTTCCCAGAGTTAACCTATTCTCCTCCTCAATATCAAACACCATCATTACCACTCTGTGATTATAACATGAACATCTTCCCGAGTGATGATCAGATTCAGACCTTTCAATATCCCCACCCTAAACGCCAGAAGTTAAGCTTTGAAGACAATCATTATCAGTTACCGTATCATAGGGATAATTATTTCTATGACGGTTTTGAAGATAATAATTACCCTTACTGTTGTTCGTTAATGCCGGAGTTTAATGATATTGGAGTCCCACCACCGCAGCTTCCGGCTCCGGCGAGTGATTATAGTGAGAAGAAATGGTGTGGGGCTGGGGAGGCGGCGGCGAGGACGGTGTCGGCGCAGAGCGTGGCGGCGAGAGAAAGGAGGAAGAAGAAGATAGCAGAGAAGACACAGGAGCTGGGGAAGATGGTTCCAGGTGGGAGCAAGATGAACACAGCTGAGATGCTTCTTGCAGCTTCCAAGTATGTTAAGTACCTGCAAGCCCAAGTTTCGATGCTTCAGATTATGAACGCACATATGGAAGATAAAGAATCAGCTTGGAGTGATAATCAAGATCAGCAATTACAAGCAATGCTTGGCAGTCCCAGTGTTGCAGAGAAGCTCTACTTGCAGGAAAAGTGCCTGGTCCCACAAAACTTGGTCACCACATTGACAAATCACACTGATATCCAAACAAGACCTTCCATTCTCAAAGAACTTCATCAGCTGATCATTGTCACAGACACTGAGAAGGAACAGCTCCAATAA 978 0.4387 MAMPLSTYFNWEASVQQTMNNDVPEIMSSYFNSFFQQETPPPPLPLVPDYSDHESFFFLDDNNPNSLLFDYYYSFPELTYSPPQYQTPSLPLCDYNMNIFPSDDQIQTFQYPHPKRQKLSFEDNHYQLPYHRDNYFYDGFEDNNYPYCCSLMPEFNDIGVPPPQLPAPASDYSEKKWCGAGEAAARTVSAQSVAARERRKKKIAEKTQELGKMVPGGSKMNTAEMLLAASKYVKYLQAQVSMLQIMNAHMEDKESAWSDNQDQQLQAMLGSPSVAEKLYLQEKCLVPQNLVTTLTNHTDIQTRPSILKELHQLIIVTDTEKEQLQ 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3263g00017 325 Gene3D - 187 261 IPR036638 GO:0046983
Pral3263g00017 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 187 236 IPR011598 GO:0046983
Pral3263g00017 325 SMART finulus 194 242 IPR011598 GO:0046983
Pral3263g00017 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 198 249 IPR036638 GO:0046983
Pral3263g00017 325 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 191 294 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3263g00017 Pral-Chr3263 83796 86003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3263g00017 32 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 34.028 9.89e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3263g00017 - - pcin:129316727 421.779