Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3263g00011 ATGAAAGATTCAAAGGCAACAGTTGAAGATTGTCAATGCAATGCAGATTTGAAGAAGTGGAAAATAATTGGTCCTACCATGGCAGCAGCTCTGATCACAATCTGCCTTGGCATTTTCTACCTAAGATGGAGGAAAGCAACTGAAGTTCAAGTTATTGTGTCATATCCGACAGACAATGGAAGAAGCAGGGAGGAGAATGAACGGGGCAACTTAGAGTCCTTTAATAGGCATACCACTGTTAATGAACTTAAAAATGATGTAAAGAAGGGGAATTTAAAAATTTTCAACTATGAATCAATCATGGAAGCAACAAACAGGTTCTCACCAGAAAACTTGCTAGGCAAAGGAGGATTTGGACATGTATATAAGGGATTATTGCCAATGGGAGAAGAAATAGCCATAAAAAGACTTTCCAGAGGTTCGGCACAAGGAGTAATTGAGTTTAAAAATGAACTCATTGTGATATCTGAACTCCAACACGTGAATCTTGTTCAGCTGTTAGGTTGCTGCATTCACGGAGAAGAGAGGATGTTAATCTATGAGTTCATGCCCAACAAAAGCTTAGACTTCTTTCTATTTGATTCTACTCGCAGCAACTTGCTAGATTGGAAAAAGCGTTTCAACATAATTGAGGGGATCTCTCAAGGATTGCTTTATCTCCATAAATACTCAAGATTAAAAGTAGTTCATAGAGATCTGAAAGCTAGTAACATTCTTCTTGATGGCAATATGAATCCTAAAATTGCAGATTTTGGTATGGCCAAGATTTTTACACAAGAATCAAATGTACAAACCAATCGGGTTGTAGGGACATATGGATACATGTCACCTGAGTATGCCATGGAAGGAATTTTCTCTACTAAATCAGATGTCTATAGTTTTGGGGTTTTGCTACTTGAAATTATAAGCGGCAGAAGAAATAACAGTTTCTACAATTCCCAAGGTCCACTAAATCTAGTAGGGCAGGCTTGGGAACAATGGAAAGAAGGTCAAGTTCTCGACATAGTTGATCCAATGTTGAGAGACCAATGTGATCCAGATCAAGTATTAAGATGTGTCCACATTGGACTTTTATGTGTAGAAGAAAATGCAGAAGATCGTCCAGCTTTGTCAGATGTTATAGCCTTGTTGGCAAGTGAAACTGCATCAATTCCTTTCCCAACAAGACCAGCATTTTATAGTGGAAGAAAGCTAAATAAGAAATATAATTCTGATGACTTTGAAACTCATTCAGTGAATGGTCTGTCTGTTTCAACCATAAAAGCAAGGTAA 1272 0.3774 MKDSKATVEDCQCNADLKKWKIIGPTMAAALITICLGIFYLRWRKATEVQVIVSYPTDNGRSREENERGNLESFNRHTTVNELKNDVKKGNLKIFNYESIMEATNRFSPENLLGKGGFGHVYKGLLPMGEEIAIKRLSRGSAQGVIEFKNELIVISELQHVNLVQLLGCCIHGEERMLIYEFMPNKSLDFFLFDSTRSNLLDWKKRFNIIEGISQGLLYLHKYSRLKVVHRDLKASNILLDGNMNPKIADFGMAKIFTQESNVQTNRVVGTYGYMSPEYAMEGIFSTKSDVYSFGVLLLEIISGRRNNSFYNSQGPLNLVGQAWEQWKEGQVLDIVDPMLRDQCDPDQVLRCVHIGLLCVEENAEDRPALSDVIALLASETASIPFPTRPAFYSGRKLNKKYNSDDFETHSVNGLSVSTIKAR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3263g00011 423 CDD STKc_IRAK 113 377 - -
Pral3263g00011 423 Gene3D Transferase(Phosphotransferase) domain 1 183 384 - -
Pral3263g00011 423 SMART serkin_6 107 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3263g00011 423 Pfam Domain of unknown function (DUF3403) 379 423 IPR021820 GO:0004674
Pral3263g00011 423 Gene3D Phosphorylase Kinase; domain 1 68 182 - -
Pral3263g00011 423 ProSiteProfiles Protein kinase domain profile. 107 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3263g00011 423 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 183 385 - -
Pral3263g00011 423 SUPERFAMILY Protein kinase-like (PK-like) 92 394 IPR011009 -
Pral3263g00011 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Pral3263g00011 423 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 72 182 - -
Pral3263g00011 423 Pfam Protein tyrosine and serine/threonine kinase 111 376 IPR001245 GO:0004672|GO:0006468
Pral3263g00011 423 ProSitePatterns Protein kinases ATP-binding region signature. 113 135 IPR017441 GO:0005524
Pral3263g00011 423 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 17 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3263g00011 Pral-Chr3263 50176 52198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3263g00011 63 392 Receptor kinase-like Gene Family AT4G23230 53.172 3.01e-128 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3263g00011 PK_Tyr_Ser-Thr 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3263g00011 - - qsa:O6P43_030202 499.204