Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3263g00009 ATGGCCATTGTGGTTACCTTGTCTATTTTCTCATTGATTTGTCTCTGGAGAACTAGTTTTGGTGCAGAAAGAAATAGCTTGAAGCCAGGTGATGTGCTTGATCACACAAGCATGCTAACCTCTGAAAACCGGAGGTTCTATCTTAAATTTGATTCAATTCAGCAGTACTCTAGCCTCACTTACCTTGTTATAGGCCGCAAAGACTCTTCCTCTGAAGCTGAAGAAGACACCAACCATGGCTATAAGAGTTGGATTGCAAACAGAAACGACCCTATTTCCAACAATTCTGGGGTTCTTACTTTGGAGTATTCAGGTGCTCTCAAAATCAACCGCCAGAACAGGAAGCCAATAACTCTGTATTCTCCTGTCAAATCTGAAGTTACCAAAAATACCATTCTAACTCTATTAGATTCAGGAAACTTGGTCCTGCGGGAGCTGCATCCCAATGGTGTTTCAAAGCGTGTGTTGTGGCAGAGTTTTGACCATCCTTCAGATATACTACTTCCTGGCATGAAGTTAGGAATTAATCACAAAACTCATCAATCTTGGTCTGTTACAGCGTCCATTTCTGATGCAACCCCAGCTTCTGGTTCATTCACTCTCGAGTGGGATCCAAGAAAAAAGCAATTAATCATTAAGAGACAAGGGCAGATATATTGGGCAAGTGGGGTGGTGAAAAACAACAGATTTGTGAACATACCAGAAGAAGTTCAGCAGTTTTATGAATACAACATTGTCTCAACAGAGGAAGAAGAGTCCTTTAGTTTCAGAGGTAAATATGATGATGAATCACAGTGGGTGCTGTTTCATAATGGTCGGTTATTGGACACAAGAGGGAGTGATTTCGTCATTGCTAGTGCTGATACTTGCTACGGCTTTAACAGTGAAAGTGGCTGTCAAAAATGGAAACCACCCAACTGCAGAAAACCTGGTGAAAAATTCCAAATTCAGTTTGAATATATCGGTTCTCCATCTGGAAATGAAAGTTTTTCTGTGAGAGACGCAAACGTTAGTATAGGTGAAAGTGATTGTAAGGCTACTTGCTGGACCAACTGTACCTGCCTTGCGTTCAAAACGGCTTTCCTCAATGGAACTGGATGCATGTATTACCATGGACATTGGAGGACAGTGCCTGTTGACTCTAGGGACGCAAGCATAAACGTCTTAATACCATCACCATATGACTCAGATCATAAAGATTTGAAGAAGTGGAAAATAATTGGTCCTACCATGGCAGCAGCTCTGATCACAATCTGCCTTGGCATTTTCTACCTAAGATGGAGGAAAGCAACTGAAGTTCAAGACAATGGAAGAAGCAGGGAGGAGAATGAACGGGGCAACTTAGAGTCCTTTAATAGGCATACCACTGTTAATGAACTTAAAAATGATGTAAAGAAGGGGAATTTAAAAATTTTCAACTATGAATCAATCATGGAAGCAACAAACAGGTTCTCACCAGAAAACTTGCTAGGCAAAGGAGGATTTGGACATGTATATAAGGGATTATTGCCAATGGGAGAAGAAATAGCCATAAAAAGACTTTCCAGAGGTTCGGCACAAGGAGTAATTGAGTTTAAAAATGAACTCATTGTGATATCTGAACTCCAACACGTGAATCTTGTTCAGCTGTTAGGTTGCTGCATTCACGGAGAAGAGAGGATGTTAATCTATGAGTTCATGCCCAACAAAAGCTTAGACTTCTTTCTATTTGATTCTACTCGCAGCAACTTGCTAGATTGGAAAAAGCGTTTCAACATAATTGAGGGGATCTCTCAAGGATTGCTTTATCTCCATAAATACTCAAGATTAAAAGTAGTTCATAGAGATCTGAAAGCTAGTAACATTCTTCTTGATGGCAATATGAATCCTAAAATTGCAGATTTTGGTATGGCCAAGATTTTTACACAAGAATCAAATGTACAAACCAATCGGGTTGTAGGGACATATGGATACATGTCACCTGAGTATGCCATGGAAGGAATTTTCTCTACTAAATCAGATGTCTATAGTTTTGGGGTTTTGCTACTTGAAATTATAAGCGGCAGAAGAAATAACAGTTTCTACAATTCCCAAGGTCCACTAAATCTAGTAGGGCAGGCTTGGGAACAATGGAAAGAAGGTCAAGTTCTCGACATAGTTGATCCAATGTTGAGAGACCAATGTGATCCAGATCAAGTATTAAGATGTGTCCACATTGGACTTTTATGTGTAGAAGAAAATGCAGAAGATCGTCCAGCTTTGTCAGATGTTATAGCCTTGTTGGCAAGTGAAACTGCATCAATTCCTTTCCCAACAAGACCAGCATTTTATAGTGGAAGAAAGCTAAATAAGAAATATAATTCTGATGACTTTGAAACTCATTCAGTGAATGGTCTGTCTGTTTCAACCATAAAAGCAAGGTAA 2403 0.3966 MAIVVTLSIFSLICLWRTSFGAERNSLKPGDVLDHTSMLTSENRRFYLKFDSIQQYSSLTYLVIGRKDSSSEAEEDTNHGYKSWIANRNDPISNNSGVLTLEYSGALKINRQNRKPITLYSPVKSEVTKNTILTLLDSGNLVLRELHPNGVSKRVLWQSFDHPSDILLPGMKLGINHKTHQSWSVTASISDATPASGSFTLEWDPRKKQLIIKRQGQIYWASGVVKNNRFVNIPEEVQQFYEYNIVSTEEEESFSFRGKYDDESQWVLFHNGRLLDTRGSDFVIASADTCYGFNSESGCQKWKPPNCRKPGEKFQIQFEYIGSPSGNESFSVRDANVSIGESDCKATCWTNCTCLAFKTAFLNGTGCMYYHGHWRTVPVDSRDASINVLIPSPYDSDHKDLKKWKIIGPTMAAALITICLGIFYLRWRKATEVQDNGRSREENERGNLESFNRHTTVNELKNDVKKGNLKIFNYESIMEATNRFSPENLLGKGGFGHVYKGLLPMGEEIAIKRLSRGSAQGVIEFKNELIVISELQHVNLVQLLGCCIHGEERMLIYEFMPNKSLDFFLFDSTRSNLLDWKKRFNIIEGISQGLLYLHKYSRLKVVHRDLKASNILLDGNMNPKIADFGMAKIFTQESNVQTNRVVGTYGYMSPEYAMEGIFSTKSDVYSFGVLLLEIISGRRNNSFYNSQGPLNLVGQAWEQWKEGQVLDIVDPMLRDQCDPDQVLRCVHIGLLCVEENAEDRPALSDVIALLASETASIPFPTRPAFYSGRKLNKKYNSDDFETHSVNGLSVSTIKAR 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3263g00009 800 Pfam Domain of unknown function (DUF3403) 756 800 IPR021820 GO:0004674
Pral3263g00009 800 PIRSF SRK 1 291 IPR024171 GO:0004674
Pral3263g00009 800 PIRSF SRK 281 800 IPR024171 GO:0004674
Pral3263g00009 800 ProSiteProfiles Bulb-type lectin domain profile. 24 156 IPR001480 -
Pral3263g00009 800 SUPERFAMILY Protein kinase-like (PK-like) 469 770 IPR011009 -
Pral3263g00009 800 Pfam PAN-like domain 338 372 IPR003609 -
Pral3263g00009 800 Gene3D Phosphorylase Kinase; domain 1 446 559 - -
Pral3263g00009 800 ProSiteProfiles Protein kinase domain profile. 484 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3263g00009 800 CDD STKc_IRAK 490 754 - -
Pral3263g00009 800 Gene3D Transferase(Phosphotransferase) domain 1 560 761 - -
Pral3263g00009 800 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 560 762 - -
Pral3263g00009 800 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 129 776 - -
Pral3263g00009 800 Gene3D - 20 160 IPR036426 -
Pral3263g00009 800 SMART serkin_6 484 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3263g00009 800 FunFam Os08g0179000 protein 455 559 - -
Pral3263g00009 800 Pfam Protein tyrosine and serine/threonine kinase 488 753 IPR001245 GO:0004672|GO:0006468
Pral3263g00009 800 Pfam D-mannose binding lectin 84 187 IPR001480 -
Pral3263g00009 800 ProSitePatterns Protein kinases ATP-binding region signature. 490 512 IPR017441 GO:0005524
Pral3263g00009 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 186 IPR036426 -
Pral3263g00009 800 SMART blect_4 30 163 IPR001480 -
Pral3263g00009 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3263g00009 Pral-Chr3263 50176 53693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3263g00009 462 769 Receptor kinase-like Gene Family AT4G23230 55.663 4.58e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3263g00009 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3263g00009 - - qsa:O6P43_029362 843.573