Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3263g00003 ATGGGCAAAGGAAGAGCTCCATGCTGTGATAAGAACAAGGTGAAGAGAGGACCTTGGAGCCCCCAAGAAGATCTTAAGCTCGTCACCTTCATCCAGAAACATGGTCATCAGAATTGGCGTTCCCTCCCCAAGCAAGCAGGGCTTCTTCGATGTGGAAAAAGCTGTCGTCTGAGATGGATCAACTACCTAAGGCCTGATGTGAAGAGAGGAAACTTCACAGAAGAAGAAGAAGAAACCATAATGAAGCTTCATGAGGTCTTAGGAAACAAGTGGTCAAAAATTGCGTCCGAGTTGCCTGGTAGAACAGACAATGAGATCAAATGTGTGGCACACCCATTTGAAGAAGAAATTATTATCGAAGAACAGTTCAGATAA 375 0.4453 MGKGRAPCCDKNKVKRGPWSPQEDLKLVTFIQKHGHQNWRSLPKQAGLLRCGKSCRLRWINYLRPDVKRGNFTEEEEETIMKLHEVLGNKWSKIASELPGRTDNEIKXCVAHPFEEEIIIEEQFR 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3263g00003 125 Gene3D - 71 109 - -
Pral3263g00003 125 ProSiteProfiles Myb-like domain profile. 64 107 IPR001005 -
Pral3263g00003 125 SUPERFAMILY Homeodomain-like 14 107 IPR009057 -
Pral3263g00003 125 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 107 IPR017930 -
Pral3263g00003 125 FunFam Transcription factor RAX3 9 69 - -
Pral3263g00003 125 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 67 IPR017930 -
Pral3263g00003 125 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 107 - -
Pral3263g00003 125 CDD SANT 18 63 IPR001005 -
Pral3263g00003 125 Gene3D - 15 68 - -
Pral3263g00003 125 CDD SANT 71 107 IPR001005 -
Pral3263g00003 125 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Pral3263g00003 125 Pfam Myb-like DNA-binding domain 69 107 IPR001005 -
Pral3263g00003 125 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Pral3263g00003 125 SMART sant 15 65 IPR001005 -
Pral3263g00003 125 SMART sant 68 116 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3263g00003 Pral-Chr3263 19667 21300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3263g00003 1 107 MYB Transcription Factor Family AT1G56160 86.916 8.18e-68 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral3263g00003 Myb_DNA-binding 1.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3263g00003 K09422 - tcc:18594753 214.542