Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3263g00001 ATGCAGATCTTCGTCAAAACTTTGACCGGAAAGACAATCACTCTCGAGGTCGAGAGTAGTGACACAATCGACAATGTTAAGGCCAAGATTCAGGACAAGGAAGGTATCCCCCCTGATCAGCAGAGGTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGTACTCTTGCTGATTATAACATTCAAAAGGAATCAACACTTCATTTGGTCTTGAGGCTTAGAGGAGGAACCATGATTAAAGTAAAGACTCTTACTGGAAAAGAAATTGAAATTGACATTGAGCCAACTGATACTATTGACCGGATCAAGGAACGTGTTGAAGAGAAAGAGGGGATTCCGCCTGTGCAGCAGAGAGACATAATTAATCTGCTCAGACTTCTTTAG 384 0.4271 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRDIINLLRLL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3263g00001 127 Gene3D - 77 126 - -
Pral3263g00001 127 SUPERFAMILY Ubiquitin-like 1 76 IPR029071 -
Pral3263g00001 127 PRINTS Ubiquitin signature 32 52 IPR019956 -
Pral3263g00001 127 PRINTS Ubiquitin signature 53 74 IPR019956 -
Pral3263g00001 127 PRINTS Ubiquitin signature 11 31 IPR019956 -
Pral3263g00001 127 FunFam Polyubiquitin 3 1 76 - -
Pral3263g00001 127 SUPERFAMILY Ubiquitin-like 78 118 IPR029071 -
Pral3263g00001 127 Pfam Ubiquitin family 3 74 IPR000626 GO:0005515
Pral3263g00001 127 Pfam Ubiquitin family 79 118 IPR000626 GO:0005515
Pral3263g00001 127 PANTHER UBIQUITIN 79 121 - -
Pral3263g00001 127 CDD Ubl_ubiquitin 1 76 - -
Pral3263g00001 127 Gene3D - 1 76 - -
Pral3263g00001 127 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Pral3263g00001 127 SMART ubq_7 77 126 IPR000626 GO:0005515
Pral3263g00001 127 SMART ubq_7 1 72 IPR000626 GO:0005515
Pral3263g00001 127 ProSitePatterns Ubiquitin domain signature. 27 52 IPR019954 -
Pral3263g00001 127 ProSiteProfiles Ubiquitin domain profile. 77 127 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3263g00001 Pral-Chr3263 10351 12356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3263g00001 1 76 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 100.000 7.45e-51 155