Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3261g00023 ATGGTTATGGTCGACGCTGGATCGACGATCGTCATGGCCACTTCGCCGTTGAAAAAGATCGAACACGCCCACCAGCTGTACCGCGATGGACGGTATGGTGACGCGCTAGGTTTCTACACGGAGGCTATTGGGATGGCTAAGACTAAGGCTCAAAAGATCGCTTTGCATAGCAATAGAGCTGCCTGTTATCTGAAGCTTCACGATTTCAAGAAGGCTGCAGAAGAATGTACCTCAGTGCTTGAGCTAGATCACAAGCACAGTGGAGCTTTGATGCTGCGGGCTCAAACATTAGTCACCCTTAAGGAGTACCATTCAGCACTTTTTGATGTCAATCGACTGTTAGAGTTGGATCCATCCTCAGAGGTGTATCAAAATCTTCAAGCTCGCTTAAGGACGCAATTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTGAAGAACAGGGAGATGAAGACGAGGTGACAGTAAAAGGAGACAATAAATGGGAAAAATCCCAAGAGAATGATGTTGGGAGAGATCATAAAGATGAGCTTGCCAAGCCTACTTTTAATACCGAAACAGACGACAAGTTATCATCTGAACAAGGAATAGACGAAAACTCTGAGCCAAAAACTTCGACACCAGAGACGATTGCCAAAGCACCACAGGAGGAACCAGCTGAGCAACATTCCAAAGCATGGCAATCGATTCCAAAACCGAAAGGGCATTCAGCTTTAAACTATGCACGATGGGACAGTGTTGAAGACGATTCCAGTGAAGAAGATGACGACGACGATGATGAAGATGAAGAAGAATCTCAACCCCAGTACCGATTTCGTGTAAGAACCATAGGAGTACGATCGGTAAAGTGA 855 0.4585 MVMVDAGSTIVMATSPLKKIEHAHQLYRDGRYGDALGFYTEAIGMAKTKAQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELDPSSEVYQNLQARLRTQLSLAPIPESEEEFEEQGDEDEVTVKGDNKWEKSQENDVGRDHKDELAKPTFNTETDDKLSSEQGIDENSEPKTSTPETIAKAPQEEPAEQHSKAWQSIPKPKGHSALNYARWDSVEDDSSEEDDDDDDEDEEESQPQYRFRVRTIGVRSVK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3261g00023 284 Gene3D Tetratricopeptide repeat domain 15 136 IPR011990 GO:0005515
Pral3261g00023 284 Pfam Tetratricopeptide repeat 68 130 - -
Pral3261g00023 284 MobiDBLite consensus disorder prediction 249 266 - -
Pral3261g00023 284 MobiDBLite consensus disorder prediction 155 185 - -
Pral3261g00023 284 MobiDBLite consensus disorder prediction 199 213 - -
Pral3261g00023 284 SUPERFAMILY TPR-like 21 133 IPR011990 GO:0005515
Pral3261g00023 284 SMART tpr_5 87 120 IPR019734 GO:0005515
Pral3261g00023 284 SMART tpr_5 53 86 IPR019734 GO:0005515
Pral3261g00023 284 MobiDBLite consensus disorder prediction 141 284 - -
Pral3261g00023 284 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 12 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3261g00023 Pral-Chr3261 211730 214576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3261g00023 18 134 Calmodulin-binding Proteins AT3G25230 34.884 6.09e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3261g00023 - - pcin:129300874 461.455