Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3261g00018 ATGAGAGAAGGTGGGAGATCAAAGCAAGGCACAATGTCGCCATGTGCGGCGTGCAAGCTTCTGCGAAGAAGATGTGCACAGGACTGTGTGTTTGCTCCTTATTTTCCAGCAGATGAACCCCAGAAATTTGCCAGTGTTCATAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAACTTCCAGAGCACCAACGCAGCGATGCAGTGAGTTCAATGGTGTATGAAGCAAACGCAAGAGTGAGAGACCCTGTGTATGGCTGCGTGGGAGCCATATCGTCTCTGCAACACCAAGTCGATGTGCTTCAAACTCAACTCGCTCTGGCTCAAGCCGAAGTTGTTCACATGAGATCACTGAGTCAATTTTCTTCTTCATCATCACCACCACAAACAACAACTGTGACTCTGCCTTCCACTTCATCCCCAGATCATCATCATCATCATCACAGTAATAACTTCAGTAATAATATTATGTCTCCTTCGCCCTCAAGCAGGCTCAGTGCCAGGTCCTTTTTTGCCATGGACGTTGCTGAGTCTTTGTGGTCGTGCTAG 555 0.4721 MREGGRSKQGTMSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQHQVDVLQTQLALAQAEVVHMRSLSQFSSSSSPPQTTTVTLPSTSSPDHHHHHHSNNFSNNIMSPSPSSRLSARSFFAMDVAESLWSC 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3261g00018 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 149 - -
Pral3261g00018 184 Coils Coil 93 113 - -
Pral3261g00018 184 MobiDBLite consensus disorder prediction 121 141 - -
Pral3261g00018 184 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Pral3261g00018 184 MobiDBLite consensus disorder prediction 121 161 - -
Pral3261g00018 184 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3261g00018 Pral-Chr3261 184555 189315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3261g00018 1 184 AS2 family AT1G16530 54.054 5.47e-66 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral3261g00018 LOB 1.4e-43 No_clan