Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3261g00015 ATGGGTGGCGAAGAACTGAGGAAGGAAGACTTTATTATGGAAGACGATGATGATGTAGTTGAACTTCCAGGGTTTCGATTTCATCCCACAGATGAAGAACTCGTGGGTTTCTATCTTCGAAGGCAGCTTGAAAAGAAACCAATCAGGATCGAACTCATCAAGCAGATCGATATCTACAAATACGATCCTTGGGACCTTCCAAAAGCAATCTGCACAGGAGGGGAGAAGGAGTGGTATTTTTTCTGCAAGAGAGGGAGGAAGTACAGGAACAGCATAAGGCCAAATAGAGTAACAGGTTCAGGGTTCTGGAAAGCCACGGGAATAGACAAGCCTGTGTATTCTCTTGCAGGAGAAGGCACTGATTGCATTGGCCTCAAGAAAACTCTTGTTTACTATAGAGGCAGTGCAGGCAAAGGCACTAAAACTGATTGGATGATGCACGAGTTTCGCCTCCCTTCTCATCAAGACGCCGCCGCCAACACCACCACCATCACCTCGACCACCACCGTTGCCCAAGAAGCTGAAATCTGGACATTGTGTCGAATTTTCAAGAGAAATGTTCCACCAAGGAAGCACATGACGGACTGGAGATCATCACAACAAGCAGGTTAA 612 0.4657 MGGEELRKEDFIMEDDDDVVELPGFRFHPTDEELVGFYLRRQLEKKPIRIELIKQIDIYKYDPWDLPKAICTGGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSLAGEGTDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSHQDAAANTTTITSTTTVAQEAEIWTLCRIFKRNVPPRKHMTDWRSSQQAG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3261g00015 203 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 191 - -
Pral3261g00015 203 SUPERFAMILY NAC domain 20 185 IPR036093 GO:0003677|GO:0006355
Pral3261g00015 203 FunFam NAC domain-containing protein 35 30 188 - -
Pral3261g00015 203 ProSiteProfiles NAC domain profile. 21 185 IPR003441 GO:0003677|GO:0006355
Pral3261g00015 203 Pfam No apical meristem (NAM) protein 23 151 IPR003441 GO:0003677|GO:0006355
Pral3261g00015 203 Gene3D NAC domain 30 187 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3261g00015 Pral-Chr3261 159428 161214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3261g00015 8 185 NAC Transcription Factor Family AT5G39820 57.979 6.25e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3261g00015 NAM 8.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3261g00015 - - aip:107612193 302.367