Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3252g00001 ATGGCTGCCAAGAAGTGCTCTCTGCTGAAGGAAGTCAATGACTCAACTGACAGATGGAGAATTACAGTTCGTGTGATCAGGAGGTGGAATGTCTACAAGAAGGAGTCTCCTACTGAGGTTTTTTGCGTGTCCATGCTACTGATAGACGAAGAGGGGACAAGAATCCAAGCTTCTATCATGAACAAAAACCTATTTGATCGTTTTAGTGCCATGGCAGTGGAAGGGATAACTTATTTTATGCCTAATTTTGTCGTCTCTCCAAATAATAAGGAGTACAGGGCAACAAACCATGCTTTCAAACTGACACTAGGTACTTACACATATGTGAAGGAAGTACTTGCCCAAATACATGAATACTCTTATCATTTCTTCCCTATTCATGACATAATTAAGATGAAGGAGAGCAACCATGTTGACTATCTTATTGATGTTATTGGATTCGTTGCATCAATTGGGCATCTGGAGAAGTACAAGTCTAATAATGAGATAAAGAACAAATTGCGATTGTTGCTGGTAGATGAGCTTGGCAATACTGTGGGTTGCGTTCTTTATGATGACTGTGCAACCAATGTCTGCATGATGGATATTAGCACCATGCAATCTCCTGTTGTGATGATTATGCAGCTTGGAAGGATTGGATTTGATGATGATGGTATGGCTGAGATTTGCAACTCATACCATGCCACCCAGATTTCATGCAATCCAAAGTTTCCAGAAGTCAAGCATTTTATCGATAGTGCTACCACATTACCGTCTCCTACTATCAGCACAATCTCTCATACTGCTACTACACAATCAAATGATCAGTCTGCAACTAGCCTGCTTTGTAACCATCCTTTGATTTTTGTTGCAGACATATGCAATCAGCCAGCTGATTCGTTCTTCCTCATAAAGTGCTTAGTAGTCAAAGTTGACACGAGGCATGGCTGGTGCTATGAAGGTTGCTCCAGGTTAAGGGTCCACTACACGGTTGAGGATTCATCTGGCAAGGCAACTGTAGTCTTCTTTGACAAACTTGCTTCTAATTTCTTCCAAAAGACTGCACTTGAGATGAATCACACTCTTATTAAGGAGGAACGTGAATATGATTTTCCTGATGAGCTAGACCTAATGGTTGGAAAGACGGTGCTCTTGAAACTTAAGCTGAACAAGTATAACGTTGACTTCCCAAATTCTGGCATATCTGTTGCATCATTCACACAGTGCACTGATTTGATGGATGAATTCAATAAGGCTACTAACACAGTCGTTCCTGAATCTGTCACTGCTGACCCCCTAGTATTGAATGAAGTTACTAATGTTGCCATCGACGAGAATGATGAAGACAGCCCCGGCATTGAGGAGATACCTCTGTCTAGGATAGCTGGCCCCTCAACTTACAGGCCAAAGAGGAAGGTAGCTGGGAAGAGGATCATTGGAGTTAAGGAGAAATGCGTTCGTTCACCCAATGCCTCACCTATCAAGACATCGTCCAAGCCTTTAAAGAGCATCAAGCAAGAGAAGAACTGA 1509 0.4201 MAAKKCSLLKEVNDSTDRWRITVRVIRRWNVYKKESPTEVFCVSMLLIDEEGTRIQASIMNKNLFDRFSAMAVEGITYFMPNFVVSPNNKEYRATNHAFKLTLGTYTYVKEVLAQIHEYSYHFFPIHDIIKMKESNHVDYLIDVIGFVASIGHLEKYKSNNEIKNKLRLLLVDELGNTVGCVLYDDCATNVCMMDISTMQSPVVMIMQLGRIGFDDDGMAEICNSYHATQISCNPKFPEVKHFIDSATTLPSPTISTISHTATTQSNDQSATSLLCNHPLIFVADICNQPADSFFLIKCLVVKVDTRHGWCYEGCSRLRVHYTVEDSSGKATVVFFDKLASNFFQKTALEMNHTLIKEEREYDFPDELDLMVGKTVLLKLKLNKYNVDFPNSGISVASFTQCTDLMDEFNKATNTVVPESVTADPLVLNEVTNVAIDENDEDSPGIEEIPLSRIAGPSTYRPKRKVAGKRIIGVKEKCVRSPNASPIKTSSKPLKSIKQEKN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3252g00001 502 Gene3D - 316 411 IPR012340 -
Pral3252g00001 502 Pfam Domain of unknown function DUF223 45 131 IPR003871 -
Pral3252g00001 502 SUPERFAMILY Nucleic acid-binding proteins 281 386 IPR012340 -
Pral3252g00001 502 Gene3D - 4 111 IPR012340 -
Pral3252g00001 502 SUPERFAMILY Nucleic acid-binding proteins 9 112 IPR012340 -
Pral3252g00001 502 SUPERFAMILY Nucleic acid-binding proteins 121 246 IPR012340 -
Pral3252g00001 502 MobiDBLite consensus disorder prediction 480 502 - -
Pral3252g00001 502 Gene3D - 115 251 IPR012340 -
Pral3252g00001 502 CDD RPA1_DBD_A_like 20 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3252g00001 Pral-Chr3252 335052 337582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3252g00001 9 361 Core DNA Replication Machinery Family AT5G61000 27.250 4.08e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3252g00001 - - pcin:129290097 373.629