Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral323g00003 ATGGAAGGTCGCCGGAGAATGACTCTTTATGATCAAATGTCTGCCGTTGACGGCCGCCGAGACTCGCTTGCGGGCTCGACCCTCGAAGCCGTGATGGCAAGCCACAAGATAGCCTCCGAGTCGAGCCGCCGCCAGTTCAGCGGCAGCCGAACCCTCTCAGACATCATTCGAGGAGACAATTCCAACACGAAGGACAAGAAATCTTGGAAAATCTTCAAAGATAAGCTCTGGCTCAAGCGCGCTGGATCTGCTTGGTTCTCCACAATCAACATCCCGGCCTTGGATATCTCTATCCCTAACCGGAATAACAACAACTCCGACGCCCCGTCAACAAGTAACCCACCCGACTTCTCAGGTCCGATCTTAGCCAGAGCTCGGTCTTCCCTCAACGACGTCTTCTCCAGCGAGTTGAGGCCCCAAACTTCGCGCTCCAATTCCTTCCGTCGAGACGGCGCGGTAACTTTCCGGGACTGCCTGGACAGCGACGGCGACGGATCCGAGTGCGACGACTGGGATCCCGCGCGTGAAGGCACGCGCCGCCTATCAACAATTCTATCAGAGGAGAGAGCGTTGTCTGAGAGAGAAGCTGAGACAGCCGCCGCGGCATCTTCGGCGGCGGTGGCGGCACAGGGGGTAGACGAGCCGGTGAGGATGTCGCTGACGCTGATGGATTTACTGGAGGAGACAGATAGGCAAATGGGGTTTGATGCATCGCGATACAGAACAGGATACGAAGATGACGACGAAGAAGTATATCAGAGGATAAAAATGGTGGAAAAGGAAGAAGAAGAAGAGGAAGAAGACAGCAAACGATGGAGCATACAGGAAAATTGTTGTGTGTGTATGGTGAGGCATAAAGGAGCAGCGTTTATACCATGTGGACACACATTTTGCAGGCAGTGTTCGAGGGAGCTTTGGGTGAGCAGAGGCCACTGTCCACTCTGCAACAATGTTATTCTGGAGATTCTTGACTTGTTCTGA 981 0.5382 MEGRRRMTLYDQMSAVDGRRDSLAGSTLEAVMASHKIASESSRRQFSGSRTLSDIIRGDNSNTKDKKSWKIFKDKLWLKRAGSAWFSTINIPALDISIPNRNNNNSDAPSTSNPPDFSGPILARARSSLNDVFSSELRPQTSRSNSFRRDGAVTFRDCLDSDGDGSECDDWDPAREGTRRLSTILSEERALSEREAETAAAASSAAVAAQGVDEPVRMSLTLMDLLEETDRQMGFDASRYRTGYEDDDEEVYQRIKMVEKEEEEEEEDSKRWSIQENCCVCMVRHKGAAFIPCGHTFCRQCSRELWVSRGHCPLCNNVILEILDLF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral323g00003 326 Pfam Zinc finger, C3HC4 type (RING finger) 275 320 - -
Pral323g00003 326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 326 IPR013083 -
Pral323g00003 326 SUPERFAMILY RING/U-box 259 322 - -
Pral323g00003 326 CDD RING-HC 278 315 - -
Pral323g00003 326 ProSiteProfiles Zinc finger RING-type profile. 278 316 IPR001841 -
Pral323g00003 326 PANTHER OS01G0917900 PROTEIN 7 326 - -
Pral323g00003 326 SMART ring_2 278 315 IPR001841 -
Pral323g00003 326 MobiDBLite consensus disorder prediction 102 117 - -
Pral323g00003 326 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral323g00003 Pral-Chr323 35579 37018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral323g00003 4 326 C3H Transcription Factor Family AT3G25030 37.273 1.85e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral323g00003 - - pcin:129290516 523.087