Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3238g00014 ATGTCTTCTCGCATAGTTGCAGAGCCTGAGAGCTCAGATACGGCGTCGTATCTCAGCTCCATCGAGCTTAACAGTTTTCCCAGTCTTCCCACTGATCATCATCAGTCTCCCACGCTGGGTCAACTTCTCAAGCATGTCGGAGATGTACGCAAGGAAGCCACCGGAGACGGCAGCGAGACGCCGCTGCATCATGCCCTTGACGTCGGAGATGGCCATGCCGGACTTGGGCCTCGTTCTTTGCCTTTCGTGCTGTCTTTTAGTAATCTAACTTACAACGTCAAGGTTCAACGGAAAATGAACTTGTCGGCGTTGTGTTCGCGGGGAAGAAATCGTCTTGGTGCTGCCGCCGCTGATGATACGATCGGTGAAGAGAGCTTCTTCTCGAGAACAAAGACCCTTCTGGATGACATCTCCGGCGAGGCCCGGGACGGTGAGATCATGGCCGTGATGGGCGCTAGTGGTTCCGGCAAGTCTACTCTCATTGACGCTTTGGCCAACCGTATAGCTAAGGGAAGCTTAAAAGGAACAGTGGCTCTAAACGGCGAGGCCATGAACTCGCGGCTTCTGAAAGCGATTTCAGCTTATGTAATGCAAGATGATCTGCTATTCCCAATGCTCACTGTCGAAGAGACTCTCATGTTCGCGGCGGAATTTCGATTACCTCGAACCCTTTCCAAATCCAAGAAGAAGATGCGAGTCCAAGCTCTGATCGACCAGCTCGGCCTCCGCAACGCCGAAAATACTGTCATCGGAGATGAGGGCCACCGTGGGGTCTCTGGAGGCGAACGCCGGCGCGTGTCCATCGGCATTGACATAATCCACGACCCCATTGTCCTCTTCCTCGACGAGCCTACCTCTGGACTGGACTCCACCAGCGCGTTCATGGTGGTGAAGGTACTTCAGAGAATCGCTCAAACCGGAAGCATCGTGATCATGTCCATACATCAACCCAGTTACAGAATCCTCGGACTCCTCGATAGAATGATCTTCCTGTCGCACGGGAAAACAGTCTACAGTGGCTCTCCGACGCAGCTCCCTACTTTCTTCGCCGAGTTCGGCCACCCGATACCAGAAAATGAGAACCGGACCGAGTTTGCGCTTGATCTGATTCGCGAACTCGAAGGCTCACCAGGTGGTACCAAAAGCTTAGTTGAGTTCAACAAATCATGGCAGAGCAAGAAGCATATTGAAAATTCAAGCTCTAATCTCAGTCCTGGACAGAGTTTATCTCTGAAAGAGGCCATCAGTGCGAGCATTTCGAAAGGGAAATTAGTTTCAGGCGCGACGAACACGAACACAAGCACAAGCTCATCATCTTCATGGATGGTTCCAACATATGCGAACCCATTTTGGATCGAACTGGCGACACTGTCAAAACGATCCTTCACCAATTCTCGCCGGATGCCTGAGCTGTTGGCAATGCGACTCGGCACCGTTATGGTGACCGGATTCCTCCTCGCTACCGTGTTCTGGCATTTAGATAACTCCCCCAAAGGAGTTCAAGAAAGACTGGGCTTCTTCGCATTCGCCATGTCCACAACCTTCTATACCACCGCCGACGCACTTCCTGTGTTCCTTCAAGAGCGACACATCTTCATGAGAGAAACCTCCCACAACGCTTACCGGCGATCATCCTACCTCATCTCTCACGCTCTTGTCGCCTTCCCTCCATTGATCTTCCTCTCTTTAGCCTTCGCGATCACCACCTTCTGGGCAGTTGGCCTCGACGGAGGTTTCTCCGGCTTCGGCTTCTACTTCGCCATCATCCTGGCCTCCTTCTGGGCTGGAAACTCCTTCGTCACCTTCCTCTCCGGCCTGGTCCCGCATGTGATGTTGGGCTACACAATAGTCGTCGCCATATTAGCCTACTTCTTGCTCTTCAGTGGCTTCTTCATAAACCGAGATCGTATTCCGGCGTACTGGATATGGTTCCATTACATATCTCTGGTGAAATACCCATATGAAGCGGTTCTTCAGAACGAATTCGGCGACCCGTTGAAGTGCTTCGTGAGGGGGGTTCAGATCTTCGATAATACGCCATTAGGGTCGGTGCCGGAGATCATGAAGGTGAAGTTACTCAAGAGTATGAGCGATACGTTAGGTGTGAACATAACGAGCACGACATGCTTGACCACCGGTTCAGACTTACTGCAACAGAACGGCGTGACGGATTTGAGCAAGTGGAATTGCTTGTGGGTCACTGTGGCTTGGGGCTTCTTGTTCAGGATTTTGTTTTACTTCTTGTTAGTGGTGGGAAGCAAGAACAAGAGAAGATAA 2277 0.5156 MSSRIVAEPESSDTASYLSSIELNSFPSLPTDHHQSPTLGQLLKHVGDVRKEATGDGSETPLHHALDVGDGHAGLGPRSLPFVLSFSNLTYNVKVQRKMNLSALCSRGRNRLGAAAADDTIGEESFFSRTKTLLDDISGEARDGEIMAVMGASGSGKSTLIDALANRIAKGSLKGTVALNGEAMNSRLLKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKMRVQALIDQLGLRNAENTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQTGSIVIMSIHQPSYRILGLLDRMIFLSHGKTVYSGSPTQLPTFFAEFGHPIPENENRTEFALDLIRELEGSPGGTKSLVEFNKSWQSKKHIENSSSNLSPGQSLSLKEAISASISKGKLVSGATNTNTSTSSSSSWMVPTYANPFWIELATLSKRSFTNSRRMPELLAMRLGTVMVTGFLLATVFWHLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERHIFMRETSHNAYRRSSYLISHALVAFPPLIFLSLAFAITTFWAVGLDGGFSGFGFYFAIILASFWAGNSFVTFLSGLVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPAYWIWFHYISLVKYPYEAVLQNEFGDPLKCFVRGVQIFDNTPLGSVPEIMKVKLLKSMSDTLGVNITSTTCLTTGSDLLQQNGVTDLSKWNCLWVTVAWGFLFRILFYFLLVVGSKNKRR 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3238g00014 758 Gene3D - 123 349 IPR027417 -
Pral3238g00014 758 ProSitePatterns ABC transporters family signature. 258 272 IPR017871 GO:0005524|GO:0016887
Pral3238g00014 758 SMART AAA_5 143 335 IPR003593 GO:0016887
Pral3238g00014 758 Pfam ABC transporter 134 286 IPR003439 GO:0005524
Pral3238g00014 758 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 744 - -
Pral3238g00014 758 Pfam ABC-2 type transporter 315 373 IPR043926 GO:0140359
Pral3238g00014 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 349 IPR027417 -
Pral3238g00014 758 FunFam ABC transporter G family member 6 123 349 - -
Pral3238g00014 758 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 116 358 IPR003439 GO:0005524
Pral3238g00014 758 Pfam ABC-2 type transporter 454 662 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3238g00014 Pral-Chr3238 413240 415903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3238g00014 133 345 Calmodulin-binding Proteins AT2G36910 28.182 5.32e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3238g00014 K05681 - qsa:O6P43_006042 1182.93