Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3235g00005 ATGATCACTGATACGGACCCGCCTCCTGTCCCTCCCACTGTTTCGGCCTCCACAGATTCTGCCTCACCTTCCGCCTCTTCTAGTGCCACGGATTCTTCATCCCATTCTGCCTCCGCTCTGCCTTCGGCCGATACCGATCAGGCCGGGCAGCCACCGGCACCGAAACCTGTGATCTTCTCCAAGGATAACAATTCGCTCTTCAGCGGTGGCGGCGTCAGCTGTCTCTCGGGAAGTCAAAATGGAAGATTGAGCTATGGATATTCCAGCTTCAAGGGGAAAAGGACTTCAATGGAGGATTTCTATGAGACAAGGATATCAGAGGTTGATGGTCAGATGGTTGCCTTTTTTGCTGTTTTTGATGGTCATGGAGGTTCTCGGACCGCTGAATACTTGAAAAAGAATCTCTTTAAGAATATAAGCAGCCATCCTGACTTTATCAAAGACACAAAGACAGCCATTGTTGAAGCATTTAAACAGACAGATGTTGATTACCTGAAGGAGGAAAAGGGTTATCATAGAGATGCTGGATCCACTGCATCAACAGCTGTATTGGTGGGGGATCGAATTGTTGTTGCCAATGTTGGTGATTCCAGAGTAGTTGCTTCTAGAGCTGGTTCAGCTATCCCTTTGTCAGTTGATCACAAACCTGATAGATCTGATGAACGTCAGAGAATTGAACAGGCTGGCGGATTCATCATGTGGGCAGGCACATGGCGGGTTGGCGGTGTTCTAGCAGTTTCCCGTGCGTTTGGTGACAAACTTCTTAAGCCATATGTTGTTGCTGATCCAGAAATTCAGGAAGCGGTGTCTTTGGTGCAAAACATAACAGACGCAGAAGCTGCATCCAGAGAACTTGTTAAAGAAGCCTACACACGAGGAAGCTCAGACAACATTACTTGTGTGGTTGTTCGATTTGATTTATCTTGA 927 0.4725 MITDTDPPPVPPTVSASTDSASPSASSSATDSSSHSASALPSADTDQAGQPPAPKPVIFSKDNNSLFSGGGVSCLSGSQNGRLSYGYSSFKGKRTSMEDFYETRISEVDGQMVAFFAVFDGHGGSRTAEYLKKNLFKNISSHPDFIKDTKTAIVEAFKQTDVDYLKEEKGYHRDAGSTASTAVLVGDRIVVANVGDSRVVASRAGSAIPLSVDHKPDRSDERQRIEQAGGFIMWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEAVSLVQNITDAEAASRELVKEAYTRGSSDNITCVVVRFDLS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3235g00005 308 SUPERFAMILY PP2C-like 76 306 IPR036457 -
Pral3235g00005 308 ProSiteProfiles PPM-type phosphatase domain profile. 84 305 IPR001932 -
Pral3235g00005 308 MobiDBLite consensus disorder prediction 15 45 - -
Pral3235g00005 308 PANTHER PROTEIN PHOSPHATASE 266 305 IPR015655 GO:0004722|GO:0006470
Pral3235g00005 308 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169
Pral3235g00005 308 Gene3D - 76 307 IPR036457 -
Pral3235g00005 308 SMART PP2C_4 74 303 IPR001932 -
Pral3235g00005 308 MobiDBLite consensus disorder prediction 1 61 - -
Pral3235g00005 308 CDD PP2Cc 84 305 IPR001932 -
Pral3235g00005 308 Pfam Protein phosphatase 2C 85 267 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3235g00005 Pral-Chr3235 220817 238427 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3235g00005 57 308 PP2C-type Phosphatase Gene Family AT1G43900 66.667 2.16e-133 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3235g00005 K17506 - gmx:100776867 445.277