Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3234g00042 ATGTCTCTCAGAAAACCTCCACTCCCCCGTCTCCTACTCAACAATGTTTCCTGCATGAGAAATGCCCAACAAATTCTTCATCACGTGAATGTATCCCTTCATGATGGCAGTGCACTTGTTTTAACTGGCGCGAATGGCTCTGGTAAGACTACTTTCCTGCGCATGTTAGCTGGATTTTCTCGTCCTTCAGCTGGTGAAATCCTTTGGGATGGCCATGACATTACACAATCTGGAATATTTCATCAGTATAAACTTCAGCTCAACTGGCTTTCCCTCAAGGATGCCATTAAAGAGAAGTTTACAGTTCTTGACAATGTTCAATGGTTTGAAGTTCTTGAAGGCAAGCAAGGTAGGTCCCTGCCTGCCCTCGAGTTGATGGGTCTGGGAAGATTGGCTAATGAGAGGCCAAGTAGACTGTCAATGGGGCAGCGGAAAAGATTGCAACTCGCCAGATTGTTGGCGATCAATCGTCCGATTTGGTTGCTTGATGAGCCTTCAGTTGCATTAGATGATGAAGGGGTGAAGTTACTTGAGTACATAATTGCAGAACACAGAAAGAATGGTGGGATTGTGATTGTGGCAACTCATTTACCAATTAAGATTGAAGATGGTATGGTCTTAAGGCTGCCCCCAAGATTTCCCAGGAGGATGACTTTAGTGGATATGCTTGATCGTGCTGATATTTAG 687 0.4454 MSLRKPPLPRLLLNNVSCMRNAQQILHHVNVSLHDGSALVLTGANGSGKTTFLRMLAGFSRPSAGEILWDGHDITQSGIFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFEVLEGKQGRSLPALELMGLGRLANERPSRLSMGQRKRLQLARLLAINRPIWLLDEPSVALDDEGVKLLEYIIAEHRKNGGIVIVATHLPIKIEDGMVLRLPPRFPRRMTLVDMLDRADI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3234g00042 228 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Pral3234g00042 228 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 223 IPR005895 GO:0017004|GO:0022857
Pral3234g00042 228 SMART AAA_5 35 223 IPR003593 GO:0016887
Pral3234g00042 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 196 IPR027417 -
Pral3234g00042 228 Gene3D - 8 207 IPR027417 -
Pral3234g00042 228 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Pral3234g00042 228 NCBIfam heme ABC exporter ATP-binding protein CcmA 13 207 IPR005895 GO:0017004|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3234g00042 Pral-Chr3234 660747 663032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3234g00042 24 178 Calmodulin-binding Proteins AT2G36910 29.825 1.26e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3234g00042 - - csin:114276788 397.512