Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3234g00029 ATGAGGATTATGATAAAGGGTGGTGTTTGGAAAAACACCGAGGATGAAATCCTCAAAGCGGCTGTCATGAAATATGGTAAAAACCAGTGGGCTCGAATCTCTTCGCTTCTGGTTCGCAAATCCGCCAAGCAATGTAAGGCTCGGTGGTACGAGTGGCTTGATCCTTCAATTAAAAAGACTGAATGGACACGAGAAGAGGATGAAAAGCTTCTTCATCTTGCTAAGCTTATGCCCACACAGTGGCGAACAATTGCTCCAATTGTAGGCCGCACCCCTTCCCAGTGCCTTGAACGGTATGAGAAACTCCTTGATGCAGCCTGTGTCAAGGATGAGAACTATGAACCTGGTGATGACCCACGAAAATTGCGACCTGGTGAGATTGACCCAAACCCTGAGTCAAAGCCTGCACGGCCAGATCCTGTTGATATGGATGAGGATGAGAAGGAAATGTTGTCTGAAGCACGAGCTAGGTTAGCCAACACAAAGGGTAAGAAGGCAAAACGAAAAGCTAGGGAGAAACAACTAGAAGAAGCCAGGAGGCTTGCCTCTTTACAAAAAAAGAGAGAATTGAAGGCTGCTGGAATTGATATCAGGCAGCGGAGGAGGAAAAGGAAAGGAATAGACTACAATGCAGAAATCCCATTTGAGAAAAGGCCACCTCCAGGTTTTTTTGATGTTACTGATGAAAACAGAGCAGTGGAGCAGCCTAAGTTCCCTACCACAATTGAAGAACTTGAGGGAAAACGAAGGGTGGATGTGGAAGCACAGTTAAGAAAGCAAGACATTGCGAAGAATAAGATTGCACAAAGGCAAGATGCCCCCTCTGCTATACTGCATGCCAACAAGCTCAATGACCCAGAAACAGTTAGAAAAAGGTCAAAACTGATGCTTCCACCACCCCAAATTTCTGATCATGAATTAGAAGAAATTGCAAAGATGGGTAGTGCTAGTGACCTTGTGGGGAGTGAGGAAATTGCTGAAGGTAGTGGTGCAACACATGCTCTTCTGGCTAATTATGCTCAAACGCCTGGCCAGGGAGTGACTCCTTTGCGAACTCCTCAGAGAACACCAGCTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATCTGGCAAGGTTGAGGGAGTCTCAGACACCGTTGTTGGGAGGAGATAATCCAGAGTTGCATCCTTCAGACTTTTCTGGGGTCACTCCTAAGAAAAAAGAAATTCAGACTCCAAATCCTATGTTGACCCCCTCTGCAACGCCTGGAGGTGCAGGTGTCACTCCTAGAAGTGGTATGACACCAGCAAGGGATGGCTTTTCTTTTGGCATGACTCCAAAGGGAACTCCTCTTAGGGATGAGCTTCGTATCAATGAAGACATGGATATGAATGAGAGCACCAAACTTGAGCTACGTAGACAAGCTGATCTCAAAAGAAGCTTGCGCTCTGGTTTAAGCAGTCTTCCACAGCCAAAAAATGAGTACCAGATAGTTATGCAACCAACTCCAGAAGATGTTGAAGAACCTGAGGAAAAGATTGAAGAGGATATGTCTGACAGAGTTGCTCGAGAAAAAGCTGAAGAAGAAGCTCGGCAACAAGCATTACTTAGAAAACGATCAAAGGTTCTTCAGAGGGAGCTTCCTAGACCTCCTGCTGCATCTTTGGAACTGATAAGAAATTCTTTGATTATTGCTGATGGAGATAAGAGTTCGTTTGTTCCTCCTACTTCTATTGAGCAAGCTGATGAGACGATAAGGAAGGAGCTTCTAAGCTTACTGGAACATGACAATGCCAAGTACCCACTTGATGAGAAAGTTAATAAGGACAGAAAAAAAGGAGTCAAGCGTGCTGCAAATGGGGCTGCTGTTGTCCCTCTGATTGAAGATTTTGAGGAAGATGAAATTAAAGATGCTGATCAGTTGATCAAGGAGGAGGCTCAGTACCTTCGTGTAGCAATGGGACATGAAAGTGAGCCCCTTGATGAATTTGTTGAAGCACATAGAACTTGCCTTAATGATCTAATGTACTTCCCTACTCGTAATGCCTATGGGCTGTCAAGTGTTGCTGGAAACATGGAGAAGCTTGCAGCTTTGCAGAATGAATTTGAGAATGTCAGAAAAAAGTTGGATGATGGCAAGGAGAAGGCGGTACGCGTTGAGAAGAAGGTGATGGTTCTTACACAAGGTTATGAGATGAGGGCAAAGAAAAGTCTTTGGCCACAAATCGAAGCCACGTTCAAGCAGATGGACACTGCTGCTACAGAACTAGAGTGCTTCCAAGTTTTGCAAAAGCAGGAGCAGCTAGCTGCATCGCATCGCATAAACAATATATGGGCTGAAGTAGGAAAGCAAAAGGAACTCGAGAAAATCTTACAAAAGAGATATGGGGATCTTCTGGCAGAAGTGGAAAGGATTCAAAACATTATGAACCAATACAGGGCGCAAGAAGAAGTTGCTGCTAAGAAGCATTCTCTTGAGTCAGCTGAGGCTGCATCTGATGATACGAGCATGCAGGGTGTAGAGAATCATGAAAGTGTATCCCACCCAGATGAGCATGGAAATGCTATGTTAGTTAATTCAACACATGATGAAACTTCAGGACAGCAAGTAGACCCGGTACAAGCTGAGGCATCATCAGGCCCCAAAAATGATATGGATGCAGATGGTGAAAAAGAGCAAATGACACACAACACTGATGTCAAACTCCAAGACGCGACACCCATTGCAGAGGAGGGGCTCAGTGCAACAGTTGTACCAGGAAAGAGCACCGATGATAGTTGTATTGTCCATTCGGAGTCCACTCTAGACACGGATGCTTCAAAGGACTCAAGTATTGAGAGATGTAGGGAGGATCAAGATTTGAAGAATCCAGATAATGTGGCCATAGACTCGCATGATGACAGAATACCCGAATCCACTGATCTGAGTTAG 2916 0.4486 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRKGIDYNAEIPFEKRPPPGFFDVTDENRAVEQPKFPTTIEELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDHELEEIAKMGSASDLVGSEEIAEGSGATHALLANYAQTPGQGVTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPKKKEIQTPNPMLTPSATPGGAGVTPRSGMTPARDGFSFGMTPKGTPLRDELRINEDMDMNESTKLELRRQADLKRSLRSGLSSLPQPKNEYQIVMQPTPEDVEEPEEKIEEDMSDRVAREKAEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLIIADGDKSSFVPPTSIEQADETIRKELLSLLEHDNAKYPLDEKVNKDRKKGVKRAANGAAVVPLIEDFEEDEIKDADQLIKEEAQYLRVAMGHESEPLDEFVEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENVRKKLDDGKEKAVRVEKKVMVLTQGYEMRAKKSLWPQIEATFKQMDTAATELECFQVLQKQEQLAASHRINNIWAEVGKQKELEKILQKRYGDLLAEVERIQNIMNQYRAQEEVAAKKHSLESAEAASDDTSMQGVENHESVSHPDEHGNAMLVNSTHDETSGQQVDPVQAEASSGPKNDMDADGEKEQMTHNTDVKLQDATPIAEEGLSATVVPGKSTDDSCIVHSESTLDTDASKDSSIERCREDQDLKNPDNVAIDSHDDRIPESTDLS 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3234g00029 971 MobiDBLite consensus disorder prediction 853 871 - -
Pral3234g00029 971 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Pral3234g00029 971 FunFam CDC5 cell division cycle 5-like 60 120 - -
Pral3234g00029 971 Gene3D - 60 114 - -
Pral3234g00029 971 Gene3D - 5 59 - -
Pral3234g00029 971 Coils Coil 167 187 - -
Pral3234g00029 971 SMART sant 58 105 IPR001005 -
Pral3234g00029 971 SMART sant 6 55 IPR001005 -
Pral3234g00029 971 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Pral3234g00029 971 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Pral3234g00029 971 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Pral3234g00029 971 Pfam pre-mRNA splicing factor component 406 655 IPR021786 -
Pral3234g00029 971 MobiDBLite consensus disorder prediction 113 150 - -
Pral3234g00029 971 Coils Coil 790 810 - -
Pral3234g00029 971 Coils Coil 683 717 - -
Pral3234g00029 971 MobiDBLite consensus disorder prediction 930 971 - -
Pral3234g00029 971 CDD SANT_CDC5_II 55 106 IPR047240 -
Pral3234g00029 971 FunFam CDC5 cell division cycle 5-like 5 59 - -
Pral3234g00029 971 MobiDBLite consensus disorder prediction 399 413 - -
Pral3234g00029 971 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 804 IPR047242 GO:0000398|GO:0000974
Pral3234g00029 971 MobiDBLite consensus disorder prediction 379 446 - -
Pral3234g00029 971 MobiDBLite consensus disorder prediction 906 971 - -
Pral3234g00029 971 MobiDBLite consensus disorder prediction 818 887 - -
Pral3234g00029 971 Pfam Myb-like DNA-binding domain 10 70 - -
Pral3234g00029 971 CDD SANT 10 53 IPR001005 -
Pral3234g00029 971 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Pral3234g00029 971 MobiDBLite consensus disorder prediction 265 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3234g00029 Pral-Chr3234 474681 481660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3234g00029 1 827 MYB-Related Transcription Factor Family AT1G09770 76.110 0.0 1234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral3234g00029 Myb_Cef 3.1e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3234g00029 K12860 - qsa:O6P43_011261 1474.53