Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3234g00021 ATGGGGTTAGTTCAAATAAATGATGTTGAGGGTTCTATGATTCCAAAACGACTAGTAGAACTTAATCAGCATATGCAAGATGAACAAAAAGTTAGAGGTGGTATTACTGGGGAGGGTCAAGATTTATCTATGGAGGACGAGTCACGGGTCAATGAAAATAATATTAATGGAGATGAAAATAACAATAGACAAATGGAGGTTATTGAGATTCAAAATCACAACATCAATAATCAAGTACGTGCTGTAAAAAAGAGCAATAAACAACAAATCCAGGGGCCTTTGGTTCGTTGGGAGAGGTTTTTGCCTGTGAGATCATTGAAGGTTTTATTGGTTGAGAATGATGATTCAACACGCCATGTTGTCTGTGCTTTACTTCGCAATTGTGGATATGAAGTTGAAGCAGTTGTAGATGGTCAACAAGCTTGGAGAATTCTTGAAGGTCTTGCTACTAATATTGATCTTGTTTTGACTGAAGTAGCCTTGCCATATTTAACAGGAATTGGTCTCTTATCCAAAATTATGAGTCATAAGACGCATAAAAATATTCCTGTGATTATGATGTCATCTCATGATTCTATGAATATAGTATTTAAGTGTTTATCCAGGGGTGCAATTGACTTTTTAATCAAGCCTTTACGAAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGAAATGCCATAGCTCTAGTGGTAGTGGAAGTGAAAGTGGTGTGCGTACTCAAGAGTCATTGAAATCTAAAAGTGGAGAACATTTAGACAACAAGCATGATAATTGTGATGAAGATGACATTGGTAGCATTGGATTGAATGCAAGAGATAAGAGTGACAACGGAAGTGGCACCCAGGTCATTATTCTACAGAGTTCTTGGACCAAGATGGCAGTTGAAGTTGATAGCCCACGACCAATGTCCCTTTGGGAACAATTAGGTGATCCACCTGTAGGTGGCACTTGTGCCCAAGTTATACATTCAATGCCTAAAATAATTGCCAACAATAAAGTGGTTACAATGAAAGATGGTGAGACACAAGATAATGCATTGAACATGGTGACAAGCATAGATTTGGAGATGACAACAGCTAGATCAACCCCAACATTGCAACCTTATAGACAACGAGAAGAAATTCCATCAAATTTTGATGCTTTTAACAATAATAAAAGCTCTAATGAAAAGGAAAATGTTTATGAGAAGGGAGAAAAGGAACAAGTAGAGCAATATAGCTCTGCCAAAGAATTAGTTGGAGAATACAAAAATCAAGCGATTGGTGGTCCAGCAAGTATTGAAATTAACATCAATTCTAACTCTGATCCTATCTTAGAAATACAATGTTTGGAGAACCCAAATGGAATGGTCTCTAATAATGTAGAAGATCATAAGAATACATATGGAAACAAGGAGGAATTGCTTTCATTTGAGTTCAATTCAAAGAGTTTGAATGGGACAGCAGCAGATCTTGGAAGTAGTGTACAAGATCACAATGTCTTAAAGCAATCACATCATTCTGCTTTCTCAAGGTACAACTCAGCATCTCATCAAGGTCCAACAGGTAATGTTGGAAGCTGTTCACCCATTAATAATAGCTCAGAGGCAGCAAAAACAGAATCAGTGCAAGCCACGAGAACTTATTTTAATAGCATGCCTCCCAATAATCTACCTTCCAATGGAAGTAATAACAACTATGAACAAGATTCCAGTTCAAATAATAATTTCACCAAACCATCTACAACCATTAATAAGCCAACACAAAAAGTAGCCATCACATGTATCCAGCCATCTTCAACATCCCTCCATCCTCTTCAAAACATGTCTCTTCAACATGCAGCTCAAGAAAATAGTGATAAGCAGCATATGCAAGTGCAGCATCATCACCATCACCACCATTATCATCACCATCATCACATGCATAACATGGTTACTCCTAAATTACTCAACCAAAATAGTCAACAGTCTCTACAAATTAAGACAGCTGCTATGCCATCTCTTAATGAATCTTCAACTAGGAATGGGAGTGCCTCTAAGAGTCACCATGGGAGCAATGTTGATCCAGGGAATAATGTTGCAGGAAAACTAGGAAACTTCCAGGAGCATGATGATAATAATAGAATAGCTGAGAAAGAGGACACAACTAGTTTAATAAGACTTGAGGCTCCAAATATAACTATCCAGAATCGATTTGCACAAAGAGAGGTGGCTTTGAACAAGTTTCGTCAAAAGAGGAAAGAGAGATGCTTTGAGAAAAGGGTTCGCTACCAAAGCAGGAAGAAACTAGCAGAACAAAGGCCTCGAGTCCGCGGACAATTTGTGCGACATGCAATTGATGAAAATAAAGAAAAATAA 2343 0.3777 MGLVQINDVEGSMIPKRLVELNQHMQDEQKVRGGITGEGQDLSMEDESRVNENNINGDENNNRQMEVIEIQNHNINNQVRAVKKSNKQQIQGPLVRWERFLPVRSLKVLLVENDDSTRHVVCALLRNCGYEVEAVVDGQQAWRILEGLATNIDLVLTEVALPYLTGIGLLSKIMSHKTHKNIPVIMMSSHDSMNIVFKCLSRGAIDFLIKPLRKNELKNLWQHVWRKCHSSSGSGSESGVRTQESLKSKSGEHLDNKHDNCDEDDIGSIGLNARDKSDNGSGTQVIILQSSWTKMAVEVDSPRPMSLWEQLGDPPVGGTCAQVIHSMPKIIANNKVVTMKDGETQDNALNMVTSIDLEMTTARSTPTLQPYRQREEIPSNFDAFNNNKSSNEKENVYEKGEKEQVEQYSSAKELVGEYKNQAIGGPASIEININSNSDPILEIQCLENPNGMVSNNVEDHKNTYGNKEELLSFEFNSKSLNGTAADLGSSVQDHNVLKQSHHSAFSRYNSASHQGPTGNVGSCSPINNSSEAAKTESVQATRTYFNSMPPNNLPSNGSNNNYEQDSSSNNNFTKPSTTINKPTQKVAITCIQPSSTSLHPLQNMSLQHAAQENSDKQHMQVQHHHHHHHYHHHHHMHNMVTPKLLNQNSQQSLQIKTAAMPSLNESSTRNGSASKSHHGSNVDPGNNVAGKLGNFQEHDDNNRIAEKEDTTSLIRLEAPNITIQNRFAQREVALNKFRQKRKERCFEKRVRYQSRKKLAEQRPRVRGQFVRHAIDENKEK 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3234g00021 780 MobiDBLite consensus disorder prediction 620 636 - -
Pral3234g00021 780 Pfam CCT motif 730 771 IPR010402 GO:0005515
Pral3234g00021 780 Pfam Response regulator receiver domain 108 219 IPR001789 GO:0000160
Pral3234g00021 780 MobiDBLite consensus disorder prediction 661 683 - -
Pral3234g00021 780 MobiDBLite consensus disorder prediction 661 688 - -
Pral3234g00021 780 SMART REC_2 106 221 IPR001789 GO:0000160
Pral3234g00021 780 MobiDBLite consensus disorder prediction 229 245 - -
Pral3234g00021 780 PANTHER TWO-COMPONENT RESPONSE REGULATOR 106 509 IPR045279 GO:0009736
Pral3234g00021 780 MobiDBLite consensus disorder prediction 498 580 - -
Pral3234g00021 780 MobiDBLite consensus disorder prediction 246 263 - -
Pral3234g00021 780 MobiDBLite consensus disorder prediction 229 263 - -
Pral3234g00021 780 ProSiteProfiles CCT domain profile. 730 772 IPR010402 GO:0005515
Pral3234g00021 780 SUPERFAMILY CheY-like 104 229 IPR011006 -
Pral3234g00021 780 ProSiteProfiles Response regulatory domain profile. 107 225 IPR001789 GO:0000160
Pral3234g00021 780 Gene3D - 105 263 - -
Pral3234g00021 780 MobiDBLite consensus disorder prediction 608 636 - -
Pral3234g00021 780 FunFam Two-component response regulator-like PRR37 106 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3234g00021 Pral-Chr3234 232925 257154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3234g00021 94 315 Response Regulator Gene Family AT5G60100 63.717 1.02e-78 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral3234g00021 Response_reg 4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3234g00021 K12129 - zju:107413622 646.736