Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3234g00020 ATGGGGTTAGTTCAAATAAATGATGTTGAGGGTTCTATGATTCCAAAACGACTAGTAGAACTTAATCAGCATATGCAAGATGAACAAAAAGTTAGAGGTGGTATTACTGGGGAGGGTCAAGATTTATCTATGGAGGACGAGTCACGGGTCAATGAAAATAATATTAATGGAGATGAAAATAACAATAGACAAATGGAGGTTATTGAGATTCAAAATCACAACATCAATAATCAAGTACGTGCTGTAAAAAAGAGCAATAAACAACAAATCCAGGGGCCTTTGGTTCGTTGGGAGAGGTTTTTGCCTGTGAGATCATTGAAGGTTTTATTGGTTGAGAATGATGATTCAACACGCCATGTTGTCTGTGCTTTACTTCGCAATTGTGGATATGAAGTTGAAGCAGTTGTAGATGGTCAACAAGCTTGGAGAATTCTTGAAGGTCTTGCTACTAATATTGATCTTGTTTTGACTGAAGTAGCCTTGCCATATTTAACAGGAATTGGTCTCTTATCCAAAATTATGAGTCATAAGACGCATAAAAATATTCCTGTGATTATGATGTCATCTCATGATTCTATGAATATAGTATTTAAGTGTTTATCCAGGGGTGCAATTGACTTTTTAATCAAGCCTTTACGAAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGAAATGCCATAGCTCTAGTGGTAGTGGAAGTGAAAGTGGTGTGCGTACTCAAGAGTCATTGAAATCTAAAAGTGGAGAACATTTAGACAACAAGCATGATAATTGTGATGAAGATGACATTGGTAGCATTGGATTGAATGCAAGAGATAAGAGTGACAACGGAAGTGGCACCCAGAGTTCTTGGACCAAGATGGCAGTTGAAGTTGATAGCCCACGACCAATGTCCCTTTGGGAACAATTAGGTGATCCACCTGTAGGTGGCACTTGTGCCCAAGTTATACATTCAATGCCTAAAATAATTGCCAACAATAAAGTGGTTACAATGAAAGATGGTGAGACACAAGATAATGCATTGAACATGGTGACAAGCATAGATTTGGAGATGACAACAGCTAGATCAACCCCAACATTGCAACCTTATAGACAACGAGAAGAAATTCCATCAAATTTTGATGCTTTTAACAATAATAAAAGCTCTAATGAAAAGGAAAATGTTTATGAGAAGGGAGAAAAGGAACAAGTAGAGCAATATAGCTCTGCCAAAGAATTAGTTGGAGAATACAAAAATCAAGCGATTGGTGGTCCAGCAAGTATTGAAATTAACATCAATTCTAACTCTGATCCTATCTTAGAAATACAATGTTTGGAGAACCCAAATGGAATGGTCTCTAATAATGTAGAAGATCATAAGAATACATATGGAAACAAGGAGGAATTGCTTTCATTTGAGTTCAATTCAAAGAGTTTGAATGGGACAGCAGCAGATCTTGGAAGTAGTGTACAAGATCACAATGTCTTAAAGCAATCACATCATTCTGCTTTCTCAAGGTACAACTCAGCATCTCATCAAGGTCCAACAGGTAATGTTGGAAGCTGTTCACCCATTAATAATAGCTCAGAGGCAGCAAAAACAGAATCAGTGCAAGCCACGAGAACTTATTTTAATAGCATGCCTCCCAATAATCTACCTTCCAATGGAAGTAATAACAACTATGAACAAGATTCCAGTTCAAATAATAATTTCACCAAACCATCTACAACCATTAATAAGCCAACACAAAAAGTAGCCATCACATGTATCCAGCCATCTTCAACATCCCTCCATCCTCTTCAAAACATGTCTCTTCAACATGCAGCTCAAGCAGAAAATAGTGATAAGCAGCATATGCAAGTGCAGCATCATCACCATCACCACCATTATCATCACCATCATCACATGCATAACATGGTTACTCCTAAATTACTCAACCAAAATAGTCAACAGTCTCTACAAATTAAGACAGCTGCTATGCCATCTCTTAATGAATCTTCAACTAGGAATGGGAGTGCCTCTAAGAGTCACCATGGGAGCAATGTTGATCCAGGGAATAATGTTGCAGGAAAACTAGGAAACTTCCAGGAGCATGATGATAATAATAGAATAGCTGAGAAAGAGGACACAACTAGTTTAATAAGACTTGAGGCTCCAAATATAACTATCCAGAATCGATTTGCACAAAGAGAGGTGGCTTTGAACAAGTTTCGTCAAAAGAGGAAAGAGAGATGCTTTGAGAAAAGGGTTCGCTACCAAAGCAGGAAGAAACTAGCAGAACAAAGGCCTCGAGTCCGCGGACAATTTGTGCGACATGCAATTGATGAAAATAAAGAAAAATAA 2331 0.3784 MGLVQINDVEGSMIPKRLVELNQHMQDEQKVRGGITGEGQDLSMEDESRVNENNINGDENNNRQMEVIEIQNHNINNQVRAVKKSNKQQIQGPLVRWERFLPVRSLKVLLVENDDSTRHVVCALLRNCGYEVEAVVDGQQAWRILEGLATNIDLVLTEVALPYLTGIGLLSKIMSHKTHKNIPVIMMSSHDSMNIVFKCLSRGAIDFLIKPLRKNELKNLWQHVWRKCHSSSGSGSESGVRTQESLKSKSGEHLDNKHDNCDEDDIGSIGLNARDKSDNGSGTQSSWTKMAVEVDSPRPMSLWEQLGDPPVGGTCAQVIHSMPKIIANNKVVTMKDGETQDNALNMVTSIDLEMTTARSTPTLQPYRQREEIPSNFDAFNNNKSSNEKENVYEKGEKEQVEQYSSAKELVGEYKNQAIGGPASIEININSNSDPILEIQCLENPNGMVSNNVEDHKNTYGNKEELLSFEFNSKSLNGTAADLGSSVQDHNVLKQSHHSAFSRYNSASHQGPTGNVGSCSPINNSSEAAKTESVQATRTYFNSMPPNNLPSNGSNNNYEQDSSSNNNFTKPSTTINKPTQKVAITCIQPSSTSLHPLQNMSLQHAAQAENSDKQHMQVQHHHHHHHYHHHHHMHNMVTPKLLNQNSQQSLQIKTAAMPSLNESSTRNGSASKSHHGSNVDPGNNVAGKLGNFQEHDDNNRIAEKEDTTSLIRLEAPNITIQNRFAQREVALNKFRQKRKERCFEKRVRYQSRKKLAEQRPRVRGQFVRHAIDENKEK 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3234g00020 776 MobiDBLite consensus disorder prediction 657 679 - -
Pral3234g00020 776 MobiDBLite consensus disorder prediction 229 287 - -
Pral3234g00020 776 ProSiteProfiles CCT domain profile. 726 768 IPR010402 GO:0005515
Pral3234g00020 776 SMART REC_2 106 221 IPR001789 GO:0000160
Pral3234g00020 776 MobiDBLite consensus disorder prediction 229 245 - -
Pral3234g00020 776 PANTHER TWO-COMPONENT RESPONSE REGULATOR 106 502 IPR045279 GO:0009736
Pral3234g00020 776 Gene3D - 105 262 - -
Pral3234g00020 776 Pfam Response regulator receiver domain 108 219 IPR001789 GO:0000160
Pral3234g00020 776 MobiDBLite consensus disorder prediction 616 633 - -
Pral3234g00020 776 MobiDBLite consensus disorder prediction 657 702 - -
Pral3234g00020 776 MobiDBLite consensus disorder prediction 602 633 - -
Pral3234g00020 776 MobiDBLite consensus disorder prediction 493 575 - -
Pral3234g00020 776 MobiDBLite consensus disorder prediction 246 271 - -
Pral3234g00020 776 ProSiteProfiles Response regulatory domain profile. 107 225 IPR001789 GO:0000160
Pral3234g00020 776 MobiDBLite consensus disorder prediction 376 396 - -
Pral3234g00020 776 SUPERFAMILY CheY-like 104 229 IPR011006 -
Pral3234g00020 776 Pfam CCT motif 726 767 IPR010402 GO:0005515
Pral3234g00020 776 FunFam Two-component response regulator-like PRR37 106 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3234g00020 Pral-Chr3234 232925 257154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3234g00020 94 310 Response Regulator Gene Family AT5G60100 65.158 5.60e-81 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral3234g00020 Response_reg 4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3234g00020 K12129 - zju:107413622 654.055