Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3234g00019 ATGGGGTTAGTTCAAATAAATGATGTTGAGGGTTCTATGATTCCAAAACGACTAGTAGAACTTAATCAGCATATGCAAGATGAACAAAAAGTTAGAGGTGGTATTACTGGGGAGGGTCAAGATTTATCTATGGAGGACGAGTCACGGGTCAATGAAAATAATATTAATGGAGATGAAAATAACAATAGACAAATGGAGGTTATTGAGATTCAAAATCACAACATCAATAATCAAGTACGTGCTGTAAAAAAGAGCAATAAACAACAAATCCAGGGGCCTTTGGTTCGTTGGGAGAGGTTTTTGCCTGTGAGATCATTGAAGGTTTTATTGGTTGAGAATGATGATTCAACACGCCATGTTGTCTGTGCTTTACTTCGCAATTGTGGATATGAAGTTGAAGCAGTTGTAGATGGTCAACAAGCTTGGAGAATTCTTGAAGGTCTTGCTACTAATATTGATCTTGTTTTGACTGAAGTAGCCTTGCCATATTTAACAGGAATTGGTCTCTTATCCAAAATTATGAGTCATAAGACGCATAAAAATATTCCTGTGATTATGATGTCATCTCATGATTCTATGAATATAGTATTTAAGTGTTTATCCAGGGGTGCAATTGACTTTTTAATCAAGCCTTTACGAAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGAAATGCCATAGCTCTAGTGGTAGTGGAAGTGAAAGTGGTGTGCGTACTCAAGAGTCATTGAAATCTAAAAGTGGAGAACATTTAGACAACAAGCATGATAATTGTGATGAAGATGACATTGGTAGCATTGGATTGAATGCAAGAGATAAGAGTGACAACGGAAGTGGCACCCAGGTCATTATTCTACAGAGTTCTTGGACCAAGATGGCAGTTGAAGTTGATAGCCCACGACCAATGTCCCTTTGGGAACAATTAGGTGATCCACCTGTAGGTGGCACTTGTGCCCAAGTTATACATTCAATGCCTAAAATAATTGCCAACAATAAAGTGGTTACAATGAAAGATGGTGAGACACAAGATAATGCATTGAACATGGTGACAAGCATAGATTTGGAGATGACAACAGCTAGATCAACCCCAACATTGCAACCTTATAGACAACGAGAAGAAATTCCATCAAATTTTGATGCTTTTAACAATAATAAAAGCTCTAATGAAAAGGAAAATGTTTATGAGAAGGGAGAAAAGGAACAAGTAGAGCAATATAGCTCTGCCAAAGAATTAGTTGGAGAATACAAAAATCAAGCGATTGGTGGTCCAGCAAGTATTGAAATTAACATCAATTCTAACTCTGATCCTATCTTAGAAATACAATGTTTGGAGAACCCAAATGGAATGGTCTCTAATAATGTAGAAGATCATAAGAATACATATGGAAACAAGGAGGAATTGCTTTCATTTGAGTTCAATTCAAAGAGTTTGAATGGGACAGCAGCAGATCTTGGAAGTAGTGTACAAGATCACAATGTCTTAAAGCAATCACATCATTCTGCTTTCTCAAGGTACAACTCAGCATCTCATCAAGGTCCAACAGGTAATGTTGGAAGCTGTTCACCCATTAATAATAGCTCAGAGGCAGCAAAAACAGAATCAGTGCAAGCCACGAGAACTTATTTTAATAGCATGCCTCCCAATAATCTACCTTCCAATGGAAGTAATAACAACTATGAACAAGATTCCAGTTCAAATAATAATTTCACCAAACCATCTACAACCATTAATAAGCCAACACAAAAAGTAGCCATCACATGTATCCAGCCATCTTCAACATCCCTCCATCCTCTTCAAAACATGTCTCTTCAACATGCAGCTCAAGCAGAAAATAGTGATAAGCAGCATATGCAAGTGCAGCATCATCACCATCACCACCATTATCATCACCATCATCACATGCATAACATGGTTACTCCTAAATTACTCAACCAAAATAGTCAACAGTCTCTACAAATTAAGACAGCTGCTATGCCATCTCTTAATGAATCTTCAACTAGGAATGGGAGTGCCTCTAAGAGTCACCATGGGAGCAATGTTGATCCAGGGAATAATGTTGCAGGAAAACTAGGAAACTTCCAGGAGCATGATGATAATAATAGAATAGCTGAGAAAGAGGACACAACTAGTTTAATAAGACTTGAGGCTCCAAATATAACTATCCAGAATCGATTTGCACAAAGAGAGGTGGCTTTGAACAAGTTTCGTCAAAAGAGGAAAGAGAGATGCTTTGAGAAAAGGGTTCGCTACCAAAGCAGGAAGAAACTAGCAGAACAAAGGCCTCGAGTCCGCGGACAATTTGTGCGACATGCAATTGATGAAAATAAAGAAAAATAA 2346 0.3781 MGLVQINDVEGSMIPKRLVELNQHMQDEQKVRGGITGEGQDLSMEDESRVNENNINGDENNNRQMEVIEIQNHNINNQVRAVKKSNKQQIQGPLVRWERFLPVRSLKVLLVENDDSTRHVVCALLRNCGYEVEAVVDGQQAWRILEGLATNIDLVLTEVALPYLTGIGLLSKIMSHKTHKNIPVIMMSSHDSMNIVFKCLSRGAIDFLIKPLRKNELKNLWQHVWRKCHSSSGSGSESGVRTQESLKSKSGEHLDNKHDNCDEDDIGSIGLNARDKSDNGSGTQVIILQSSWTKMAVEVDSPRPMSLWEQLGDPPVGGTCAQVIHSMPKIIANNKVVTMKDGETQDNALNMVTSIDLEMTTARSTPTLQPYRQREEIPSNFDAFNNNKSSNEKENVYEKGEKEQVEQYSSAKELVGEYKNQAIGGPASIEININSNSDPILEIQCLENPNGMVSNNVEDHKNTYGNKEELLSFEFNSKSLNGTAADLGSSVQDHNVLKQSHHSAFSRYNSASHQGPTGNVGSCSPINNSSEAAKTESVQATRTYFNSMPPNNLPSNGSNNNYEQDSSSNNNFTKPSTTINKPTQKVAITCIQPSSTSLHPLQNMSLQHAAQAENSDKQHMQVQHHHHHHHYHHHHHMHNMVTPKLLNQNSQQSLQIKTAAMPSLNESSTRNGSASKSHHGSNVDPGNNVAGKLGNFQEHDDNNRIAEKEDTTSLIRLEAPNITIQNRFAQREVALNKFRQKRKERCFEKRVRYQSRKKLAEQRPRVRGQFVRHAIDENKEK 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3234g00019 781 MobiDBLite consensus disorder prediction 621 638 - -
Pral3234g00019 781 MobiDBLite consensus disorder prediction 607 638 - -
Pral3234g00019 781 MobiDBLite consensus disorder prediction 662 707 - -
Pral3234g00019 781 SMART REC_2 106 221 IPR001789 GO:0000160
Pral3234g00019 781 MobiDBLite consensus disorder prediction 229 245 - -
Pral3234g00019 781 ProSiteProfiles CCT domain profile. 731 773 IPR010402 GO:0005515
Pral3234g00019 781 PANTHER TWO-COMPONENT RESPONSE REGULATOR 106 509 IPR045279 GO:0009736
Pral3234g00019 781 Pfam CCT motif 731 772 IPR010402 GO:0005515
Pral3234g00019 781 MobiDBLite consensus disorder prediction 498 580 - -
Pral3234g00019 781 Pfam Response regulator receiver domain 108 219 IPR001789 GO:0000160
Pral3234g00019 781 MobiDBLite consensus disorder prediction 246 263 - -
Pral3234g00019 781 MobiDBLite consensus disorder prediction 229 263 - -
Pral3234g00019 781 SUPERFAMILY CheY-like 104 229 IPR011006 -
Pral3234g00019 781 Gene3D - 105 263 - -
Pral3234g00019 781 ProSiteProfiles Response regulatory domain profile. 107 225 IPR001789 GO:0000160
Pral3234g00019 781 MobiDBLite consensus disorder prediction 662 684 - -
Pral3234g00019 781 FunFam Two-component response regulator-like PRR37 106 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3234g00019 Pral-Chr3234 232925 257155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3234g00019 94 315 Response Regulator Gene Family AT5G60100 63.717 1.08e-78 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral3234g00019 Response_reg 4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3234g00019 K12129 - zju:107413622 647.891