Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3234g00018 ATGGGGTTAGTTCAAATAAATGATGTTGAGGGTTCTATGATTCCAAAACGACTAGTAGAACTTAATCAGCATATGCAAGATGAACAAAAAGTTAGAGGTGGTATTACTGGGGAGGGTCAAGATTTATCTATGGAGGACGAGTCACGGGTCAATGAAAATAATATTAATGGAGATGAAAATAACAATAGACAAATGGAGGTTATTGAGATTCAAAATCACAACATCAATAATCAAGTACGTGCTGTAAAAAAGAGCAATAAACAACAAATCCAGGGGCCTTTGGTTCGTTGGGAGAGGTTTTTGCCTGTGAGATCATTGAAGGTTTTATTGGTTGAGAATGATGATTCAACACGCCATGTTGTCTGTGCTTTACTTCGCAATTGTGGATATGAAGTTGAAGCAGTTGTAGATGGTCAACAAGCTTGGAGAATTCTTGAAGGTCTTGCTACTAATATTGATCTTGTTTTGACTGAAGTAGCCTTGCCATATTTAACAGGAATTGGTCTCTTATCCAAAATTATGAGTCATAAGACGCATAAAAATATTCCTGTGATTATGATGTCATCTCATGATTCTATGAATATAGTATTTAAGTGTTTATCCAGGGGTGCAATTGACTTTTTAATCAAGCCTTTACGAAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGAAATGCCATAGCTCTAGTGGTAGTGGAAGTGAAAGTGGTGTGCGTACTCAAGAGTCATTGAAATCTAAAAGTGGAGAACATTTAGACAACAAGCATGATAATTGTGATGAAGATGACATTGGTAGCATTGGATTGAATGCAAGAGATAAGAGTGACAACGGAAGTGGCACCCAGGTCATTATTCTACAGAGTTCTTGGACCAAGATGGCAGTTGAAGTTGATAGCCCACGACCAATGTCCCTTTGGGAACAATTAGGTGATCCACCTGTAGGTGGCACTTGTGCCCAAGTTATACATTCAATGCCTAAAATAATTGCCAACAATAAAGTGGTTACAATGAAAGATGGTGAGACACAAGATAATGGCATAGATTTGGAGATGACAACAGCTAGATCAACCCCAACATTGCAACCTTATAGACAACGAGAAGAAATTCCATCAAATTTTGATGCTTTTAACAATAATAAAAGCTCTAATGAAAAGGAAAATGTTTATGAGAAGGGAGAAAAGGAACAAGTAGAGCAATATAGCTCTGCCAAAGAATTAGTTGGAGAATACAAAAATCAAGCGATTGGTGGTCCAGCAAGTATTGAAATTAACATCAATTCTAACTCTGATCCTATCTTAGAAATACAATGTTTGGAGAACCCAAATGGAATGGTCTCTAATAATGTAGAAGATCATAAGAATACATATGGAAACAAGGAGGAATTGCTTTCATTTGAGTTCAATTCAAAGAGTTTGAATGGGACAGCAGCAGATCTTGGAAGTAGTGTACAAGATCACAATGTCTTAAAGCAATCACATCATTCTGCTTTCTCAAGGTACAACTCAGCATCTCATCAAGGTCCAACAGGTAATGTTGGAAGCTGTTCACCCATTAATAATAGCTCAGAGGCAGCAAAAACAGAATCAGTGCAAGCCACGAGAACTTATTTTAATAGCATGCCTCCCAATAATCTACCTTCCAATGGAAGTAATAACAACTATGAACAAGATTCCAGTTCAAATAATAATTTCACCAAACCATCTACAACCATTAATAAGCCAACACAAAAAGTAGCCATCACATGTATCCAGCCATCTTCAACATCCCTCCATCCTCTTCAAAACATGTCTCTTCAACATGCAGCTCAAGCAGAAAATAGTGATAAGCAGCATATGCAAGTGCAGCATCATCACCATCACCACCATTATCATCACCATCATCACATGCATAACATGGTTACTCCTAAATTACTCAACCAAAATAGTCAACAGTCTCTACAAATTAAGACAGCTGCTATGCCATCTCTTAATGAATCTTCAACTAGGAATGGGAGTGCCTCTAAGAGTCACCATGGGAGCAATGTTGATCCAGGGAATAATGTTGCAGGAAAACTAGGAAACTTCCAGGAGCATGATGATAATAATAGAATAGCTGAGAAAGAGGACACAACTAGTTTAATAAGACTTGAGGCTCCAAATATAACTATCCAGAATCGATTTGCACAAAGAGAGGTGGCTTTGAACAAGTTTCGTCAAAAGAGGAAAGAGAGATGCTTTGAGAAAAGGGTTCGCTACCAAAGCAGGAAGAAACTAGCAGAACAAAGGCCTCGAGTCCGCGGACAATTTGTGCGACATGCAATTGATGAAAATAAAGAAAAATAA 2328 0.378 MGLVQINDVEGSMIPKRLVELNQHMQDEQKVRGGITGEGQDLSMEDESRVNENNINGDENNNRQMEVIEIQNHNINNQVRAVKKSNKQQIQGPLVRWERFLPVRSLKVLLVENDDSTRHVVCALLRNCGYEVEAVVDGQQAWRILEGLATNIDLVLTEVALPYLTGIGLLSKIMSHKTHKNIPVIMMSSHDSMNIVFKCLSRGAIDFLIKPLRKNELKNLWQHVWRKCHSSSGSGSESGVRTQESLKSKSGEHLDNKHDNCDEDDIGSIGLNARDKSDNGSGTQVIILQSSWTKMAVEVDSPRPMSLWEQLGDPPVGGTCAQVIHSMPKIIANNKVVTMKDGETQDNGIDLEMTTARSTPTLQPYRQREEIPSNFDAFNNNKSSNEKENVYEKGEKEQVEQYSSAKELVGEYKNQAIGGPASIEININSNSDPILEIQCLENPNGMVSNNVEDHKNTYGNKEELLSFEFNSKSLNGTAADLGSSVQDHNVLKQSHHSAFSRYNSASHQGPTGNVGSCSPINNSSEAAKTESVQATRTYFNSMPPNNLPSNGSNNNYEQDSSSNNNFTKPSTTINKPTQKVAITCIQPSSTSLHPLQNMSLQHAAQAENSDKQHMQVQHHHHHHHYHHHHHMHNMVTPKLLNQNSQQSLQIKTAAMPSLNESSTRNGSASKSHHGSNVDPGNNVAGKLGNFQEHDDNNRIAEKEDTTSLIRLEAPNITIQNRFAQREVALNKFRQKRKERCFEKRVRYQSRKKLAEQRPRVRGQFVRHAIDENKEK 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3234g00018 775 SMART REC_2 106 221 IPR001789 GO:0000160
Pral3234g00018 775 MobiDBLite consensus disorder prediction 229 245 - -
Pral3234g00018 775 Gene3D - 105 263 - -
Pral3234g00018 775 Pfam Response regulator receiver domain 108 219 IPR001789 GO:0000160
Pral3234g00018 775 MobiDBLite consensus disorder prediction 656 678 - -
Pral3234g00018 775 ProSiteProfiles CCT domain profile. 725 767 IPR010402 GO:0005515
Pral3234g00018 775 MobiDBLite consensus disorder prediction 246 263 - -
Pral3234g00018 775 MobiDBLite consensus disorder prediction 375 395 - -
Pral3234g00018 775 MobiDBLite consensus disorder prediction 229 263 - -
Pral3234g00018 775 PANTHER TWO-COMPONENT RESPONSE REGULATOR 106 501 IPR045279 GO:0009736
Pral3234g00018 775 MobiDBLite consensus disorder prediction 615 632 - -
Pral3234g00018 775 ProSiteProfiles Response regulatory domain profile. 107 225 IPR001789 GO:0000160
Pral3234g00018 775 MobiDBLite consensus disorder prediction 656 701 - -
Pral3234g00018 775 MobiDBLite consensus disorder prediction 601 632 - -
Pral3234g00018 775 SUPERFAMILY CheY-like 104 229 IPR011006 -
Pral3234g00018 775 MobiDBLite consensus disorder prediction 492 574 - -
Pral3234g00018 775 FunFam Two-component response regulator-like PRR37 106 264 - -
Pral3234g00018 775 Pfam CCT motif 725 766 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3234g00018 Pral-Chr3234 232925 257155 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3234g00018 94 315 Response Regulator Gene Family AT5G60100 63.717 1.09e-78 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral3234g00018 Response_reg 4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3234g00018 K12129 - zju:107413622 647.891