Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3223g00050 ATGGGAACACGAATTAGGGTATCCTATTATGATCTTTTGCATGGAACAGATGGATTTGATGAGAGTAACCTTCTTGGCTTTGGATATTATGGATCAGTATACAAAGCAACTCTTCCAAATGGAATGATAGTTGCTGTTAAAGTATTTTGCTCAAACTTGGATGAAGCATTATTGAGTTTTGATATTGAGTGTGTTGTAGCATGCAATTTACGACACCGCAATCTTGTTAAGATTATTACTAGCTGCTCAAATGGTTATTTTAAGTGTCTAATAATGGAGTTCATGTCAAATGGGAATCTAGATAGATGGTTATACTCTCATAACAACTGTTTAGATATCCTAAAAAGGTTGAATATATTGATTGATGTGGCAGTTGCATTAGAATATCTTCATTATGGTTCTTCTACACCAGTTGTCCATTGTGATCTAAAACCGAGCAATGTCTTGTTAGATGAAAATATGGTGGCTCATCTTACTGATTTTGGTGTAGCTAAATTGGTGGGTGAAGAACACTTGAAAATTTATACAAAAACTTTGGCCACAATTGGTTATATGGCACCAGAGTATGGATCAGAAGGAGCTATTTCCATTAAAGGAGATGTGTACAGCTATGGCTACAATGGTTTGTATCCGGTTAATCTTGTTGGTATCAAAGCTAAGGATGACTTAAGATGGGTTTGTCCTTGGAATAAAGGGCTAATTGAGTGTTTGGTGAAAAGAATCATCATAGATTGGATTCCAAGACATTGTAACTTGGTCGCTGATTGGTTTGCTCATGTAGCTCTGAGAGAAAAGTGCTTGAAAAACCAGGTTTTACAACCCCCTTCTCCTTTGCCAAAAATCCTAGTTGATGATGCTCATATGGTTGGGAATCTTGTTACCTGA 885 0.365 MGTRIRVSYYDLLHGTDGFDESNLLGFGYYGSVYKATLPNGMIVAVKVFCSNLDEALLSFDIECVVACNLRHRNLVKIITSCSNGYFKCLIMEFMSNGNLDRWLYSHNNCLDILKRLNILIDVAVALEYLHYGSSTPVVHCDLKPSNVLLDENMVAHLTDFGVAKLVGEEHLKIYTKTLATIGYMAPEYGSEGAISIKGDVYSYGYNGLYPVNLVGIKAKDDLRWVCPWNKGLIECLVKRIIIDWIPRHCNLVADWFAHVALREKCLKNQVLQPPSPLPKILVDDAHMVGNLVT 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3223g00050 294 SMART serkin_6 19 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3223g00050 294 ProSiteProfiles Protein kinase domain profile. 19 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3223g00050 294 Gene3D Transferase(Phosphotransferase) domain 1 95 207 - -
Pral3223g00050 294 SUPERFAMILY Protein kinase-like (PK-like) 5 206 IPR011009 -
Pral3223g00050 294 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 205 - -
Pral3223g00050 294 ProSitePatterns Protein kinases ATP-binding region signature. 25 47 IPR017441 GO:0005524
Pral3223g00050 294 Gene3D Phosphorylase Kinase; domain 1 3 94 - -
Pral3223g00050 294 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Pral3223g00050 294 FunFam Os07g0541700 protein 95 182 - -
Pral3223g00050 294 Pfam Protein kinase domain 20 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3223g00050 Pral-Chr3223 1251254 1264104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3223g00050 6 213 Receptor kinase-like Gene Family AT3G47090 44.444 2.89e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3223g00050 Pkinase 8.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3223g00050 - K13420 pcin:129285519 317.775