Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3223g00048 ATGGTATCTAGGTCTTATTCTAACTTGTTTGAGCTTACTTCCTGCGATTCCCCAACTTTTGGTCGGGAGAAGAAGAGGCTTCCTCGAGTGGCGACTGTTGCTGGGGTACTTTCAGAACTAGATGATGAGAGCAACAGTGCTGGCTCTGATGCTCCCTCCTCCATCTCTCAAGATAGGATGATTATTGTTGGTAACCAGCTTCCTTTGCAAGCTCACAGAAAAGATGATGGTAAGTGGGATTTTACCTTGGATGAGGACTCTCTTCTTTTACAGCTGAAAGATGGCCTAGGCGATGATGTAGAGGTGATCTATATTGGGTGTCTTAAAGAAGAAATTGATGTGAGCGAGCAGGACGATGTTGCTCTGTATTTGCTTGACACTTTCAAATGTGTACCCACGTTCCTACCTCCTGAGCTTTTCAGCAAATTCTATCATGGGTTCTGCAAACAGCATCTATGGCCTTTATTTCACTACATGCTTCCACTGTCACCTGATCTTGGTGGTCGATTTGATCGGTCTCTTTGGCAAGCTTATGTTTCCGTGAATAAGATATTTGCAGATAAAGTAATGGAAGTCATTAGCCCTGATGATGACTTTGTCTGGGTTCATGACTACCATTTGATGGTTCTGCCAACATTTTTGAGGAAGAGATTTAACAGGGCGAGGCTAGGATTCTTCCTCCACAGTCCATTCCCTTCCTCTGAGATTTACCGAACACTTCCTGTGAGGGATGAACTTCTTAGAGCTCTTTTGAACTCTGACCTTATCGGGTTTCATACTTTTGATTATGCAAGGCACTTTCTCTCATGTTGCAGTAGAATGCTCGGGCTTTCTTATCAATCCAAGCGGGGCTACATAGGCCTTGAGTATTATGGTAGAACTGTTAGTATCAAGATTCTTCCTGTTGGAATCCATATTGGCCAACTTCAATCTGTCATGAATCTTCCTGAGACGGAGAATAAGGTCTCAGAATTACGAGACCAGTTCAGAGGTCAAACTGTGATGCTTGGCGTTGATGACATGGATATCTTCAAAGGAATCAGCTTAAAACTTTTGGCCATGGAGCAATTGCTGTACCAACATCCAGATAAGAGGGGACAAGTTGTTATGGTCCAAATTGCAAATCCTGCAAGAGGACGAGGGAAGGATGTACAGGAGGTACAAAGTGAAACTTATGCCACTGTAAAAAGGATTAATGATACATTTGGAAGGCCTGGATACACACCTGTTATCTTGATTGACACACCACTCAAATTCTATGAGCGAATAGCTTATTATATAATTGCAGAATGTTGTCTTGTGACAGCAGTGAGAGATGGTATGAACCTTATACCCTATGAATATGTCATTTGTCGACAAGGAAATGAGAAACTAGACCAGATTTTGGGGATAAATCCATTTTCTCAAAAGAGGAGCATGCTGGTGGTATCTGAATTCATTGGGTGCTCCCCTTCATTAAGTGGGGCAATTCGAGTGAATCCATGGAACATTGATGCTGTTGCCGAAGCTATGGATTCTGCCCTTGTAATCCCGGAATCTGAGAAACAGATGCGACATGAGAAACATTATAGGTATGTTAGCACACATGATGTTGCATATTGGGCACGTAGCTTCTTGCAGGATTTGGAAAGAGCATGTAGGGACCATCTTAGAAGGAGGTGTTGGGGCATTGGTTTTGGCCTAGGATTTCGGGTAATTGCTTTAGATCCAAATTTCAGAAAGCTATCAGTTGAGCATATTGTTTCGGCTTACAAGAGGACCAAGCACCGGGCAATTCTTTTGGATTATGATGGTACCATGATGCAGCCAGGAACAATTAGTACGACCCCAAGTGCTGATGCTGTTGGAATCTTGAAGAGCCTTTGCAGCGACCCTGATAATGTTGTTTTCATTGTTAGTGGGAAGGAGAGAAAGACTCTGACTGATTGGTTTTCGTCATGTGAAAGGCTAGGGATTGCTGCAGAACATGGTTACTTTTTGAAGACAAGTAATGCTGCAGAATGGGAAACTTGTCTCTCTGTCCCGGATTTTGACTGGAAACAGATTGCTGAGCCAGTAATGCAATTATACACAGAAACAACAGATGGTTCTAACATTGAGGCCAAAGAAAGTGCTTTAGTTTGGAACTATCAGTATGCAGACCGTGACTTTGGTTCATGCCAGGCTAAGGAGCTTCTAGACCACCTGGAAAGTGTTCTTGCTAATGAACCTGTATCTGTTAAAAGTGGCCCTCACATCGTGGAAGTTAAACCCCAGGGTGTCAACAAGGGAATTGTAGCAGAACGTCTTCTCATAACAATGCGTGAAAAGGGAGTAATTCCAGACTTTGTTCTGTGCATTGGTGATGACAGATCAGATGAGGACATGTTTGAAGTAATCATGAGTGCGAGGGAGACTCTGTCGCCGGTTGCTGAGGTTTTCGCCTGCACGGTAGGGCAGAAACCAAGCAAGGCCAAGTATTACTTGGAAGACACAAGTGAGATATTGAGAATGTTGCAAGGCCTTGCACATGCTTCTGAGCAATCTGCTAAAAGTTCTTCCCAACCTTCATCACACTGA 2559 0.4334 MVSRSYSNLFELTSCDSPTFGREKKRLPRVATVAGVLSELDDESNSAGSDAPSSISQDRMIIVGNQLPLQAHRKDDGKWDFTLDEDSLLLQLKDGLGDDVEVIYIGCLKEEIDVSEQDDVALYLLDTFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRARLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMNLPETENKVSELRDQFRGQTVMLGVDDMDIFKGISLKLLAMEQLLYQHPDKRGQVVMVQIANPARGRGKDVQEVQSETYATVKRINDTFGRPGYTPVILIDTPLKFYERIAYYIIAECCLVTAVRDGMNLIPYEYVICRQGNEKLDQILGINPFSQKRSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALVIPESEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDGTMMQPGTISTTPSADAVGILKSLCSDPDNVVFIVSGKERKTLTDWFSSCERLGIAAEHGYFLKTSNAAEWETCLSVPDFDWKQIAEPVMQLYTETTDGSNIEAKESALVWNYQYADRDFGSCQAKELLDHLESVLANEPVSVKSGPHIVEVKPQGVNKGIVAERLLITMREKGVIPDFVLCIGDDRSDEDMFEVIMSARETLSPVAEVFACTVGQKPSKAKYYLEDTSEILRMLQGLAHASEQSAKSSSQPSSH 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3223g00048 852 Gene3D Glycogen Phosphorylase B; 52 310 - -
Pral3223g00048 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 589 706 - -
Pral3223g00048 852 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 34 837 IPR001830 GO:0003824|GO:0005992
Pral3223g00048 852 FunFam Trehalose-6-phosphate synthase 2 673 752 - -
Pral3223g00048 852 SUPERFAMILY HAD-like 590 836 IPR036412 -
Pral3223g00048 852 Pfam Trehalose-phosphatase 593 826 IPR003337 GO:0003824|GO:0005992
Pral3223g00048 852 FunFam Alpha,alpha-trehalose-phosphate synthase 312 527 - -
Pral3223g00048 852 Pfam Glycosyltransferase family 20 59 543 IPR001830 GO:0003824|GO:0005992
Pral3223g00048 852 CDD HAD_TPP 591 827 - -
Pral3223g00048 852 CDD GT20_TPS 59 543 IPR001830 GO:0003824|GO:0005992
Pral3223g00048 852 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Pral3223g00048 852 Gene3D Glycogen Phosphorylase B; 311 527 - -
Pral3223g00048 852 NCBIfam trehalose-phosphatase 588 836 IPR003337 GO:0003824|GO:0005992
Pral3223g00048 852 Gene3D - 589 706 IPR023214 -
Pral3223g00048 852 Gene3D - 715 851 IPR023214 -
Pral3223g00048 852 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 719 848 - -
Pral3223g00048 852 NCBIfam HAD-IIB family hydrolase 592 794 IPR006379 -
Pral3223g00048 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3223g00048 Pral-Chr3223 1145665 1151040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3223g00048 1 850 Trehalose Biosynthesis Gene Families AT4G17770 77.855 0.0 1438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3223g00048 K16055 - gmx:100782799 1537.7