Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3223g00034 ATGGCTTTTGAGCCGTTAATTTGGTACTGCCAGCCAGAGAAGAACTTCATCTGGGCTAATCTTGTAGACAGTGCTTTTGGGTCCTATACACCATGTGCAATGAACACTATTGTGATCTCCGTCTCCAATTTGGTTCTCATTGTCCTTTGTTTATATCGAATATGGCTGACTATGAGCAATGCCAAAGCCCAAAGATTTTGCTTGAGCTCAAATTACTATAATTATTTTCTGGGATTGTTGGCGGGTTACTGTGCTGCTCAACCTTTACTGAGATTGGCATATGGCATTTCTGATTTCAACTTGAATGGAGAATCTGGTTTTGCTCCTTTTGAGATAACAGGTCTGATCATTGAAGCACTTACTTGGTCCTCAATGTTAATTCTTCTTGTCATGGAGACTAAGATTTATATAAAGCATTTTCGGTGGTTTGTGAGGTTTGCCGTCTTTTATGTTTTGGTGGCAGATCTTGTAATGCTTAATCTTCTTCTATCAGTGATAAATTACTGCAGCAGATCTGCCCTGTATCTGTTCATCAGCACCATGTTCTGCCAGGTGCTATTTGGAATTCTCCTTCTTGTTTACATTCCCAGTTTAGTTCCTTACTCTGGCTACGTAACAGTACAAGAAGATCTTCATGAGAATGCTGAGTATGAGCTACTTTGTGGAGAACAGCAAGTTTTCCCCGAGAGATATGTTAATGTATTTTCCAGATTGTCGTTTGGTTGGATGACTCCACTCATGCAACAAGGCTATAGAAAACCCATCACTGAAAATGATGTTTGGAAGTTAGACACATGGGATCAAACGGACATGCTTTTTGAAAAGTTCCAAAAGTGTTGGATGTTAGAACGTCAAAGGTCTAAACCTTGTCTTTTAAGAGCATTAAATAATAGCCTTGGAAAAAGGTTTTGGTGGGGAGGTGTTTTTAAGATTTGCTATGATCTTTCTCAGTTTGTGGGGCCTATTTTGCTGAATCATTTATTAAAATCGATGCAACAAGGAGATCCATCTTGGATTGGCTACATCTATGCTTTCTGCATATTTGCAGGAGTGTCATTTGGTGTACTTTGTGAGGCTCAATATTTTCAAAGTGTTATGCGTGTTGGTTTCCAGCTAAGGTCAACTTTGGTGGCTGGCATATTTTACAAGTCCCTGAGATTAAGGCATGAGGATCGTAGCAAGTTCTCACCTGGAAAGATTATGAATATGATGACAACAGATGCCAGTGCTCTACAGCAAATATGTCAGCAACTTCATGGACTTTGGTCATCACCATTTCGTATCATCATGGCTATGGTTCTTCTATACCAGCAATTGGGCGTTGCTTCGCTTTTTGGATTACTGATGCTAGTTCTCATTATCCCAATGCAGACAATCGTTCTCAGCAAAATGCGAAAATTCATCAGGGAGGGACAGCAACAGACAGACAAGAGAGTTGGCCTCATGAATGAAATTCTGACTGCCATGGATACTGTAAAGTGTTATGCATGGGAGACAAGCTTCCAGTCTAGAGTTCAAGGCATACGATTTGATGAGCTTTTATGGTTCCGCCGTGCACAACTTCTATCTGCTCTTAACACTTTTATGCTGAACAGCATCCCAGTTCTTGTGACTGTAACTACATTCGGAATGTTCACTTTACTTGGTGGAGAGTTGACACCTGCAAGGGCATTTACCTCTTTATCTCTATTTGCAGTTTTGCGTTATCCTTTAAATATGCTTCCCAGTTTGTTAAGTCAGGTTGTGAGTGCAATTGTGTCATTGCAACGTTTACAGGAACTACTCTTAGCTGAGGAGCGATTTTTAAAACCCAATCCACCTCTTGTACCAGGACTTCCAGCCATATCCATCCAGAATGGGTACTTTTCCTGGGATGCAAAGATGGAGAAGCCCTTGTTATCAGATATAAACTTGGAAATACCCATTGGCAGCTTAGTTGCGATAGTTGGTGGTACAGGACAAGGGAAAACATCACTTGTGTCAGCAATGATTGGAGAGCTTCCTCCTATAGCTGATGCAAATGTTATAATCAGAGGCACTGTAGCTTATGTTCCTCAGATTTCATGGATTCTTAATGCTACTGTCCGTGAAAATATACTATTTGGATCTAAGTTTGAATATGAACGGTATCAGAAGGCCATCGATGTCACCGCATTACAGCATGATATTGACTTACTTCCTGGACGTGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATCAGTGGTGGACAAAAGCAAAGAGTTTCCTTGGCAAGAGCTGTATACTCAAATTCAGATGTGTATATATTTGATGACCCTTTAAGCGCCCTTGATAGTCATGTTGCCCAAGAGGTTTTCAAGAGCTGTATAAAGGAAGGGCTGCAAGGAAAAACCAGGATTCTTGTCACCAACCAACTTCATTTCCTCCCTCAGGTGGATCATATCATTCTGATTAGGGAAGGAGTGATAGAAGAGCAGGGAACCTTTGAGAAGCTATCTAAAAGTGGGCCACTATTCCAGAAACTAATGGAAAATGCAGGCAAAATGGAAGAAAAACTAAATCATACGAATGATAGAGATGTCTATAATAAAACTAATTTTCTACCAGCAACCAATGATGTGATTTTAGAGATTCCAAATGGTACAAGACATAAAAAGAAGGGGAAATTGCAAAAATCCATGCTTATTAAAGAAGAAGATCGGGAAACAGGAGTTGTCAGCTGGAAAGTTTTGATGAGGTACAAGTCTACTCTAGGAGGACTCTGGGCAGTTTTAGTACTCTTCACATGCTATGTAACAACAGAAATTCTTCGAATTTCAAGTAGCACATGGTTAAGCATGTGGACCAGTAAAACTACTGCAGCTGGTTATAAACAAGGATATTTTATTTCCATCTATGCAGTTCTTTCATTTGGGCAGGTAATTGTTACTCTTGCTAACTCTTACTGGCTGATCATTTCAAGTCTTCGTGCTGCCAAAAGATTGCATGATGCCATGTTACATAAAATACTACGGGCTCCAATGGTATTCTTTCATACCAATCCTGTTGGACGCATACTTAATAGGTTTGCAAGAGACCTGGGAGACATTGATCGCAATGTTGCTAGTTTTGTGAATTTGTTTATGGGTCAATTCTGGCAACTCCTTTCGACTTTTGTTCTTATTGGCATTGTGAGCTCATTATCTCTGTGGGCCATAATGCCACTTCTGATCTTGTTTTATGCAGCTTATTTGTATTACCAGAGTTTATCTCGTGAGGTGAAGAGGTTGGATTCAATTACAAGATCTCCCGTCTATGCACAATTTGCAGAAGCATTGAATGGTTTGACAAGCATTCGTGCTTACAAAGCATATGATAGGATGGCGCACATTAATGGAAGACTCATGGACAACAATATTAGATTCACTCTGGTGAATATTAGTTCAAATCGGTGGCTCACCATAAGGTTGGAAACATTAGGAGGCCTCATGATTTGGTTAATAGCAACGTTTGCTGTAATGCAAAATGCAACAGCCCATAACCAAGCCATGTTTGCAGCTACAATGGGTCTACTTCTCAGTTATTCTTTAAACATCACAAATCTCTTGAGTCGTGTCCTTAGACAAGCTAGTAGAGCTGAAAATAGTTTAAATGCGGTTGAGCGTGTTGACACATACATAGAAATGGAAACTGAGGCTCCAGCTATTATTGAGACTAACCGCCCACCACCTGGATGGCCATCATCAGGATCAATTGAATTTGAGGATGTTGTCCTGCGGTACAGGCCCGAACTTCCTCCAGTTTTGCATGGGTTGTCTTTTAGAGTCTCTCCAACTGAGAAGGTAGGAATTGTCGGACGAACTGGTGCAGGAAAATCCAGCATGCTCAATGCTTTATTCCGGATTGTGGAACCGCATAAAGGAAAAATCATTATTGATGGTTGTGATATTTCTAAATTTGGAGTTGCAGATTTACGAAAAGTTCTCACTGTCATACCACAAACACCAGTTCTTTTCTCTGGAACTGTGCGATTCAATCTTGATCCTTTTATGGAACACACTGATGCTGAGCTCTGGGAGGCTCTAGAAAGGTCGCATTTGAAAAGTGTGGTCAGCAGAAATTCCTTTGGCCTAGATTTTGAGGTTTCTGAGCAGGGAGAAAACTTCAGTGTTGGGCAGAGACAACTGTTAAGTCTAGCTAGGGCCTTGATACGAAGATCTAAAATTCTTGTTCTAGATGAGGCTACTGCAGCAGTTGATGTTAGAACCGATGCCCTTATACAGAAAACTATTCGCCAAGAATTTAAGTCCTGCACGATGCTTATTATTGCACACAGACTGAATACAATTATCGACTGCAATCGTATTCTTGTGATTGATACTGGCAAGGCTCTTGAATACAGCACACCTCAGGAGCTCCTGCTAGAAGAAGAAAGTGCATTTTGCAAGATGGTTCAAAGTACTGGACTTGCTAATGCTCAGTACTTACGTGGCCTAGCATTTGGAAAAATTAATGAAAATCCTTGTGAAGAAAACAAGGATCACTAG 4509 0.4047 MAFEPLIWYCQPEKNFIWANLVDSAFGSYTPCAMNTIVISVSNLVLIVLCLYRIWLTMSNAKAQRFCLSSNYYNYFLGLLAGYCAAQPLLRLAYGISDFNLNGESGFAPFEITGLIIEALTWSSMLILLVMETKIYIKHFRWFVRFAVFYVLVADLVMLNLLLSVINYCSRSALYLFISTMFCQVLFGILLLVYIPSLVPYSGYVTVQEDLHENAEYELLCGEQQVFPERYVNVFSRLSFGWMTPLMQQGYRKPITENDVWKLDTWDQTDMLFEKFQKCWMLERQRSKPCLLRALNNSLGKRFWWGGVFKICYDLSQFVGPILLNHLLKSMQQGDPSWIGYIYAFCIFAGVSFGVLCEAQYFQSVMRVGFQLRSTLVAGIFYKSLRLRHEDRSKFSPGKIMNMMTTDASALQQICQQLHGLWSSPFRIIMAMVLLYQQLGVASLFGLLMLVLIIPMQTIVLSKMRKFIREGQQQTDKRVGLMNEILTAMDTVKCYAWETSFQSRVQGIRFDELLWFRRAQLLSALNTFMLNSIPVLVTVTTFGMFTLLGGELTPARAFTSLSLFAVLRYPLNMLPSLLSQVVSAIVSLQRLQELLLAEERFLKPNPPLVPGLPAISIQNGYFSWDAKMEKPLLSDINLEIPIGSLVAIVGGTGQGKTSLVSAMIGELPPIADANVIIRGTVAYVPQISWILNATVRENILFGSKFEYERYQKAIDVTALQHDIDLLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDSHVAQEVFKSCIKEGLQGKTRILVTNQLHFLPQVDHIILIREGVIEEQGTFEKLSKSGPLFQKLMENAGKMEEKLNHTNDRDVYNKTNFLPATNDVILEIPNGTRHKKKGKLQKSMLIKEEDRETGVVSWKVLMRYKSTLGGLWAVLVLFTCYVTTEILRISSSTWLSMWTSKTTAAGYKQGYFISIYAVLSFGQVIVTLANSYWLIISSLRAAKRLHDAMLHKILRAPMVFFHTNPVGRILNRFARDLGDIDRNVASFVNLFMGQFWQLLSTFVLIGIVSSLSLWAIMPLLILFYAAYLYYQSLSREVKRLDSITRSPVYAQFAEALNGLTSIRAYKAYDRMAHINGRLMDNNIRFTLVNISSNRWLTIRLETLGGLMIWLIATFAVMQNATAHNQAMFAATMGLLLSYSLNITNLLSRVLRQASRAENSLNAVERVDTYIEMETEAPAIIETNRPPPGWPSSGSIEFEDVVLRYRPELPPVLHGLSFRVSPTEKVGIVGRTGAGKSSMLNALFRIVEPHKGKIIIDGCDISKFGVADLRKVLTVIPQTPVLFSGTVRFNLDPFMEHTDAELWEALERSHLKSVVSRNSFGLDFEVSEQGENFSVGQRQLLSLARALIRRSKILVLDEATAAVDVRTDALIQKTIRQEFKSCTMLIIAHRLNTIIDCNRILVIDTGKALEYSTPQELLLEEESAFCKMVQSTGLANAQYLRGLAFGKINENPCEENKDH 1502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3223g00034 1502 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Pral3223g00034 1502 Coils Coil 833 853 - -
Pral3223g00034 1502 FunFam Multidrug resistance-associated protein member 4 1223 1475 - -
Pral3223g00034 1502 FunFam ABC transporter C family member 2 609 855 - -
Pral3223g00034 1502 Coils Coil 1190 1210 - -
Pral3223g00034 1502 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 919 1202 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3223g00034 1502 CDD ABCC_MRP_domain1 615 815 - -
Pral3223g00034 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Pral3223g00034 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1473 IPR003439 GO:0005524
Pral3223g00034 1502 FunFam ABC transporter C family member 2 279 600 - -
Pral3223g00034 1502 Pfam ABC transporter 1256 1404 IPR003439 GO:0005524
Pral3223g00034 1502 ProSitePatterns ABC transporters family signature. 1376 1390 IPR017871 GO:0005524|GO:0016887
Pral3223g00034 1502 CDD ABC_6TM_ABCC_D1 305 591 IPR044746 GO:0140359
Pral3223g00034 1502 SUPERFAMILY ABC transporter transmembrane region 299 604 IPR036640 GO:0005524|GO:0016020
Pral3223g00034 1502 CDD ABCC_MRP_domain2 1237 1457 - -
Pral3223g00034 1502 Pfam ABC transporter transmembrane region 306 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3223g00034 1502 Pfam ABC transporter transmembrane region 919 1161 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3223g00034 1502 Gene3D - 611 862 IPR027417 -
Pral3223g00034 1502 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Pral3223g00034 1502 Gene3D ABC transporter type 1, transmembrane domain 880 1220 IPR036640 GO:0005524|GO:0016020
Pral3223g00034 1502 Gene3D ABC transporter type 1, transmembrane domain 285 600 IPR036640 GO:0005524|GO:0016020
Pral3223g00034 1502 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 230 1478 - -
Pral3223g00034 1502 SUPERFAMILY ABC transporter transmembrane region 916 1219 IPR036640 GO:0005524|GO:0016020
Pral3223g00034 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1230 1472 IPR027417 -
Pral3223g00034 1502 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3223g00034 1502 CDD ABC_6TM_ABCC_D2 918 1214 IPR044726 GO:0140359
Pral3223g00034 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 838 IPR027417 -
Pral3223g00034 1502 Gene3D - 1222 1475 IPR027417 -
Pral3223g00034 1502 SMART AAA_5 1265 1444 IPR003593 GO:0016887
Pral3223g00034 1502 SMART AAA_5 642 822 IPR003593 GO:0016887
Pral3223g00034 1502 FunFam ABC transporter C family member 2 882 1220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3223g00034 Pral-Chr3223 698786 725724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3223g00034 560 831 Calmodulin-binding Proteins AT2G36910 27.986 1.56e-23 107