Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3223g00027 ATGGCGATTCAGGTGGTCGCATCATCATCATCATCATCATCTTCATCATCACCCCCTAGCTTCACCAACGGAACAAAGTATAGATATGATGTTTTTCTGAGTTTCAGAGGCGAAGATACTCGCCAAACCTTCACTGTGCCTCTCTACGATGCTTTGCGATGCAACGGAATCAACGCCTTCATTGATGACAAGAAGCTTGGGAAAGGGGAAGAGATCTCACCTACGCTTCTTAAAGCCATTGAGAGATCAAGGATTTCCATTATTGTCTTCTCTAGGAACTATGCTACTTCCACATGGTGCTTAGAGGAACTCGCCCACATCGTTTGGTGCAAGAAGGAGAAGAACCAGTTGGTTATGCCCATCTTTTATAAGGTGAATCCGTTGGATGTTCAGTATCAAAGAAATAGCTTTGAGGAAGCCATGGCTGATCTTGAACATAGTTTCCATGGCAACTTGAAGAAAGTGCAAAAATGGAGGTCCGCTTTGTCTGAAGCTGCAAGCTTATCATCAACATGGCTTTTCGATGATGGAAACCAAGTCAAGTTCATTGAAGGAATTGCCAAATATGCATATGCTATGCTGCCTCCTAAACGCTTTCATAACACTGATCATATGGTTGGACTTGAGCCTCGCGTAGAGGAGGCGATGTCACTTTTGAATCAATCTAATGATGCTGTTTGTATGTTGGGAATCCATGGAACTGGTGGAGTTGGCAAAACAACCCTTGCAAAAGCTATTTATAATTCAATCTTCCACCAATTTGAAGGTTCATGTTTTCTGTTTGATGTGAAAGGAGTATCAAAGAAATACAAGGGCATTGTTCGCCTTCAACAAACATTTTTATCAGAGATTCTTGAGGAGAAGAGGATGAAGTTTGCTAGTGTTGATGAAGGAATATCAAAAATAAAACATAGACTCTCTCATAAAAAGGTTTTCTTGGTTCTTGATGACATTGATGAGGTTGAACAGTTAGAACAGCTTGCAGGGGGATGTGATTGGTTTGGTCGCGGAAGCAAGATCGTTATAACAACAAGAAATAAGCAAGTGCTAATTGCATGTAATGTTAAGAAAACATATGAAATGAAGAAGCTAAATCAGCTTTACTCTCTTGAACTCTTCTGTTGGTATGCGTTTTGTACAAGCCAACCTCCAAAAGATTATAAAAATATGTCCATTCATGTGATAAGGCATGTACATGGCCTTCCTCTCGCTTTAAAATTAATCGGCTCCAATTTGGCACATAAAAGCATTGAGGAATGGAGATCTATATTGAAGCAGTATGATGAGATTCCAGAAAGAACAATTCATCATGTATTGAAAATAAGTTATGATTGCTTACAAGATGGTGCTAAGCATATTTTCTTAGATATTGCTTGTTTCTTTAGAGAGGAGGAATTTGAATTTGTTGAGGCAATACTAAAAGCTTGTGATTCTGGGGCAAGGTTTTATATCGAGGTTCTTGTTGACAAATCTCTAGTAACCATTGCTGATAATGGTTACTTGTACATGCATGATCTTATACAACAAATGGGTAGAGAGATTGTTAGGCAAGAAGCACCATCAGATCTTGGCAAGCGCAGTAGATTATGGTATTATGAAGATGTTCTCAAAGTACTACATGAAAATTTAGGAGGCAACAATATTGAAGGAATAATACTAGATCCACCTCAGGAAGAAGAAGTGAAGTGCAGTGATTTAGCCTTTGAGAAGATGAATAATCTTAGAATTGTCATTATTCGCAATACCCGATTCTTAACATGTCCTAAATATCTTCCAAATAGTTTAATATTACTTGATTGGCAGGGGTATCCTTCTGTGAATTTGCCTCCAGATTTTTCTCCTCCGAAGCTGGTTTGCCTCAAGATATGCGGAAGTCCTTTCAGCTTAGAGCATTCATTCGAGAATTTTGAATACTTGACATATTTGGATTTCTCAAAGTGTGAATTCATAACTGAAGTACCTGACATGTCTCAATTTCAAAACTTAAAAACATTAAGCTTCCGTGAATGTCACAATCTGGTCAAAGTTCATGATTCTGTGGGATCTCTCTGTAAGCTTGTCGAATTAAACGTTAGTAAGTGCATCAAACTTGCAAGCTTTCCACAGGAAATCAAGATGCCATCTCTTCAAGTTCTTAATTTCAATAATTGCAAGAGTCTTGACTACTTCCCACACATCGTTGGAAACATGGATCCATTAATGTATGTTTATGCAGAAGGCAGCGCTATTAATAAGCTCCCATCTTCTATTGGAAATCTTCCAAAGCTTGATATTTTAAGTTTAAGATCTTGCGAAAAGCTTAGGGAGCTTCCGAACAGCTTATTGACATTGCATAATCTTGGAGTGCTTCTATTAGGAGGTCTAAAACCTCATGGGAGAAAATCTCTGAAGAAATTAATGCAAGAGAGCCAACCACCAACTATTAGCTGCACAAACATAGACCGCTTGGATCTCCATAACTGTGGTCTATTAGATGAAGATCTTCACCTAACTCTGAAATGTTTTCAGAATATGAGAGACTTGAATCTATCAGGAAATGATTTTGTGTCCCTTCCTGAGTGCATTAAGGACTGTGTTCATTTGTGGAAACTACAAGTGAGTGACTGCAAGAGACTTAGAGATATACCTGAGCTGCCATCAAGTTTAGGGGACATAACGGCAGAGAATTGCACATCATTAACCACAGAGTCTTCAGGCCATTTATGGTCTCAGGCCATAAAGTGCAATCGCATGGCTATCTGGATGCCAGCAACAACATATCCAGAAGAAGAGTTGGAAGGACTTAATAAGTCTCTTCAATTGGATTGGAATGATGTGGAAATACAAGTTACATCTCGCACAGATGATATAGCCATAGTTAACTGTGGAGTTTATGTTGACAAGAAGCAAACAAACATGGGGAATGTACAGTTCAAGTCTCCCTTTCCTTCAAGAGCTTCACGGAAACGAAAGGCCATGGCCTCTCATCCTAACGAACCACCCAAGAAGCGCTTGAGAAAGTTCAATAACGCAGTGAAGGATAAGGAGAGCTAA 3033 0.391 MAIQVVASSSSSSSSSSPPSFTNGTKYRYDVFLSFRGEDTRQTFTVPLYDALRCNGINAFIDDKKLGKGEEISPTLLKAIERSRISIIVFSRNYATSTWCLEELAHIVWCKKEKNQLVMPIFYKVNPLDVQYQRNSFEEAMADLEHSFHGNLKKVQKWRSALSEAASLSSTWLFDDGNQVKFIEGIAKYAYAMLPPKRFHNTDHMVGLEPRVEEAMSLLNQSNDAVCMLGIHGTGGVGKTTLAKAIYNSIFHQFEGSCFLFDVKGVSKKYKGIVRLQQTFLSEILEEKRMKFASVDEGISKIKHRLSHKKVFLVLDDIDEVEQLEQLAGGCDWFGRGSKIVITTRNKQVLIACNVKKTYEMKKLNQLYSLELFCWYAFCTSQPPKDYKNMSIHVIRHVHGLPLALKLIGSNLAHKSIEEWRSILKQYDEIPERTIHHVLKISYDCLQDGAKHIFLDIACFFREEEFEFVEAILKACDSGARFYIEVLVDKSLVTIADNGYLYMHDLIQQMGREIVRQEAPSDLGKRSRLWYYEDVLKVLHENLGGNNIEGIILDPPQEEEVKCSDLAFEKMNNLRIVIIRNTRFLTCPKYLPNSLILLDWQGYPSVNLPPDFSPPKLVCLKICGSPFSLEHSFENFEYLTYLDFSKCEFITEVPDMSQFQNLKTLSFRECHNLVKVHDSVGSLCKLVELNVSKCIKLASFPQEIKMPSLQVLNFNNCKSLDYFPHIVGNMDPLMYVYAEGSAINKLPSSIGNLPKLDILSLRSCEKLRELPNSLLTLHNLGVLLLGGLKPHGRKSLKKLMQESQPPTISCTNIDRLDLHNCGLLDEDLHLTLKCFQNMRDLNLSGNDFVSLPECIKDCVHLWKLQVSDCKRLRDIPELPSSLGDITAENCTSLTTESSGHLWSQAIKCNRMAIWMPATTYPEEELEGLNKSLQLDWNDVEIQVTSRTDDIAIVNCGVYVDKKQTNMGNVQFKSPFPSRASRKRKAMASHPNEPPKKRLRKFNNAVKDKES 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3223g00027 1010 PRINTS Disease resistance protein signature 228 243 - -
Pral3223g00027 1010 PRINTS Disease resistance protein signature 305 319 - -
Pral3223g00027 1010 PRINTS Disease resistance protein signature 398 412 - -
Pral3223g00027 1010 PRINTS Disease resistance protein signature 704 720 - -
Pral3223g00027 1010 Gene3D - 23 197 IPR035897 -
Pral3223g00027 1010 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 774 IPR044974 GO:0006952
Pral3223g00027 1010 Gene3D - 363 447 IPR042197 -
Pral3223g00027 1010 SUPERFAMILY Toll/Interleukin receptor TIR domain 24 168 IPR035897 -
Pral3223g00027 1010 Gene3D Ribonuclease Inhibitor 520 732 IPR032675 -
Pral3223g00027 1010 SUPERFAMILY L domain-like 515 899 - -
Pral3223g00027 1010 FunFam Disease resistance protein (TIR-NBS-LRR class) 25 194 - -
Pral3223g00027 1010 MobiDBLite consensus disorder prediction 972 1010 - -
Pral3223g00027 1010 Pfam TIR domain 29 188 IPR000157 GO:0007165
Pral3223g00027 1010 Gene3D Ribonuclease Inhibitor 733 911 IPR032675 -
Pral3223g00027 1010 Pfam NB-ARC domain 211 429 IPR002182 GO:0043531
Pral3223g00027 1010 MobiDBLite consensus disorder prediction 985 1010 - -
Pral3223g00027 1010 ProSiteProfiles TIR domain profile. 27 194 IPR000157 GO:0007165
Pral3223g00027 1010 Gene3D - 198 361 IPR027417 -
Pral3223g00027 1010 SMART till_3 28 168 IPR000157 GO:0007165
Pral3223g00027 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 457 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3223g00027 Pral-Chr3223 524832 530893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3223g00027 29 871 WRKY Transcription Factor Family AT4G12020 30.046 1.59e-88 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3223g00027 - - pcin:129285870 1263.06