Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3223g00015 ATGGAAAAAAATATATTCCTGGGTGTTAAACTTGTGAATAAGGCTTCCAAATTCATGGCCTTTGGGCACTACCTATCCCAGGGATGGAAACCCAACCCTAGTGATGATGAAAACTCCATGAACGGTTGCTTTGATTGCAACATATGCTTAGACTTTGCTCGCGAACCGGTAGTCACTCATTGTGGCCACCTTTACTGCTGGCCCTGCATCTACAAGTGGCTTCATCTCCAAACTGAGACCTTAACATCTGATGAGCACCCTCAATGCCCAGTTTGCAAAGCTTGTATATCCTCTACCACAATCATCCCGCTCTATGGTCGAGGGCAGGCCTCACTGGCTCAAAGCGAGCGCCACGATGAGAAGGAATCGGATCTGGACATTTCTATACCGCCAAGGCCACCTGCTGCTAGCGTTGAAGCTCCATTGCCATCATCTTCTCCTCATAACACTTATCAGAATCAGCATTCTGCTACTTCTCTAAACCTTGAGAATGCTTCTTCATCACCGCGGGTTGTTAATGTTGGTGCTACCTTGATGCCAGGTTTTCATCATCTTCTGCATGGGATGTTTGGGGAGATGGTGTATGCTAGAGTGTTTGGCAACCCGGAAAATATATACGCCTATCGGAATTCTTATCATGTGCTGGGCCCTAACAGCCCCAGATTGAGAAGACAGGAGATGCAGGCAGACAAATCCTTGAAGAGAGTATCAATTTTCCTGTGTTGCTGCCTTGTTTTGTGTCTTCTAGTGTTTTGA 756 0.4643 MEKNIFLGVKLVNKASKFMAFGHYLSQGWKPNPSDDENSMNGCFDCNICLDFAREPVVTHCGHLYCWPCIYKWLHLQTETLTSDEHPQCPVCKACISSTTIIPLYGRGQASLAQSERHDEKESDLDISIPPRPPAASVEAPLPSSSPHNTYQNQHSATSLNLENASSSPRVVNVGATLMPGFHHLLHGMFGEMVYARVFGNPENIYAYRNSYHVLGPNSPRLRRQEMQADKSLKRVSIFLCCCLVLCLLVF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3223g00015 251 MobiDBLite consensus disorder prediction 142 156 - -
Pral3223g00015 251 ProSiteProfiles Zinc finger RING-type profile. 46 93 IPR001841 -
Pral3223g00015 251 SUPERFAMILY RING/U-box 39 105 - -
Pral3223g00015 251 CDD RING-HC_AtRMA-like 44 94 - -
Pral3223g00015 251 MobiDBLite consensus disorder prediction 112 156 - -
Pral3223g00015 251 Pfam zinc finger of C3HC4-type, RING 46 92 - -
Pral3223g00015 251 ProSitePatterns Zinc finger RING-type signature. 61 70 IPR017907 -
Pral3223g00015 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 158 IPR013083 -
Pral3223g00015 251 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 34 248 IPR045103 GO:0005783|GO:0006511|GO:0061630
Pral3223g00015 251 SMART ring_2 46 92 IPR001841 -
Pral3223g00015 251 MobiDBLite consensus disorder prediction 113 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3223g00015 Pral-Chr3223 225810 229116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3223g00015 1 237 C3H Transcription Factor Family AT4G27470 38.306 1.74e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3223g00015 K10666 - gmx:100779793 266.929