Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3223g00014 ATGGCTGAGACTTCTGGACCTAAAGGAACCCACGAGGTTGTTCTTACTGTCAAGAATGACAAATCTAATGAAGGCTCCATCATCTTTGTCTCTACCCCTTTCTTACAGAAGCTGGTGGCAGAGTTGGTGGGGACATACTTTCTAATATTTATTGGGGGTGCATCAATAGTGGTAAACATTAACAACAACAACGTCGTAACGCTTCCTGGGATTGCCATCGTTTGGGGTCTTCTCGTCATGGCTCTTGTCTATTCTCTTGGTCACATCTCTGGTGCTCATTTCAATCCTGCCGTCACTATCGCTTTTGCTTCCACTAAACGATTTCCCCTCAAACAGGTGCCAGCTTATATATTAATTCAGGTTTTAGGATCCACTCTTGCAAGTGTGACTCTCAGACTGGTTTTCACAGGAAAACATGACCGATTCATAGGAACATTATTATCTGGGTCGTATCTTCAGGGCTTTGTGGTTGAATTCTTAATCACCTTCTACCTCATGTTTGTCATCTCTGGTGTGGCAACTGATGGCAGAGCGATTGGTGAGCTGGCTGGGATTGTCGTAGGGGCAACCGTAATGCTTATTGTGTTGTCCGCCGGGCCGGTAACAGGATCGTCAATGAACCCGGCGAGAAGCCTAGGGCCAGCAATTGTGTGGCACGAGTATAGAGGAATATGGGTGTATATGATAGCACCAGTGGGGGGAGCAATAGCAGGGGCATGGGTATACAACATCATGAGGTATACAAACAAGCCAGTGCATGAGATCACAGCAAAGAGCGCTTCTTTCCTCAAATCTTCAAGCTGTTGTGGTGCCTCCAACTGA 822 0.4647 MAETSGPKGTHEVVLTVKNDKSNEGSIIFVSTPFLQKLVAELVGTYFLIFIGGASIVVNINNNNVVTLPGIAIVWGLLVMALVYSLGHISGAHFNPAVTIAFASTKRFPLKQVPAYILIQVLGSTLASVTLRLVFTGKHDRFIGTLLSGSYLQGFVVEFLITFYLMFVISGVATDGRAIGELAGIVVGATVMLIVLSAGPVTGSSMNPARSLGPAIVWHEYRGIWVYMIAPVGGAIAGAWVYNIMRYTNKPVHEITAKSASFLKSSSCCGASN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3223g00014 273 Gene3D Glycerol uptake facilitator protein. 11 258 IPR023271 -
Pral3223g00014 273 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral3223g00014 273 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral3223g00014 273 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral3223g00014 273 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral3223g00014 273 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral3223g00014 273 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral3223g00014 273 Pfam Major intrinsic protein 31 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral3223g00014 273 SUPERFAMILY Aquaporin-like 30 255 IPR023271 -
Pral3223g00014 273 NCBIfam MIP family channel protein 40 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral3223g00014 273 ProSitePatterns MIP family signature. 93 101 IPR022357 -
Pral3223g00014 273 PANTHER AQUAPORIN NIP2-1 24 260 IPR034294 -
Pral3223g00014 273 CDD MIP 36 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3223g00014 Pral-Chr3223 204908 208170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3223g00014 36 265 Major Intrinsic Protein MIP AT5G37820 59.565 3.07e-92 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3223g00014 K09874 - gmx:100798526 367.851