Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3223g00009 ATGGCTACTGTAAAATCATTGTTTTACAAAGGTTCAAACAATGTCCAATTTATTGGCATTTGGGGTATGGGTGGTATAGGCAAAACAACTCTCGCAAAAGCATTATTTAACAAATTATGCTTTGCATATGAAGGGTTTTGCTTTTTGGCTAATTTAAGGGAAGAATCAAAGAAATATGGAATTGATACTTTGAAGAAAAAACTTATTTTGAGGTTATTAAGGCATAAAAAATCTCACATCGGCATAGTTGATGCCATATCTCCTTATGCCATGAGTAGACTTGGTTGGGAAAAAAGTTTCAATGCTCTTGATGATGTTGATGATCATGAACAATTAGAACATTTAGCCGGAAGACATGATTGGTTTGGATTAGGGAGTAAAATCTTGATAACCACTAGAGATAAGCAAGTCCTTGGTAGGAAAGTTGATGGTATATATAAACTCGAAGCTTTGAATTCGAATGAGGCTTTTCAACTTTTCTCCTTGAATGCCTTTAGAAAAGACTGCAGTGATCCAAAAGTAAGGATGTTGGCAATGGATGTGACTTACTATGGAAATGGAAATCCATTAGCCCTTAAAGGAAGTGAAGCCAATGAAGGCATAACTCTAAACGTTTCAGAGGTTGAAGATATGTGCCCAAGTCTTCAAGCCTTTTGCTTAATGCCTAATCTAAGTCAGACTATTGCGTTGGGTAGGATATCCTTAAAGTCCTTACCTACAACATTCAAGGTTGAAAATCTTATTGAAATTGGAATGCCTAATGGCAATCTCACAAAACTTTGGAAAGAAGTCCAGGTACGTGCTTCAGAGGTTCTATGGCTGAAGGATTGTAGTAACTTGTCTGAACTTCCTGACAACATCCGCTTGTTGACATCATTACGTGTGTTAGAACTCTCAAGGACTAATATAGAGACCTTGCCTTTAAGCATCAAACACCTTTCGAGCCTGCATGATATTTACTTGGATGGATGCAAAAAACTTCAGTCTCTACCAGAACTCCCTCCCTCTCTCTTAACATTGTCTACGAGGAGCTGTCGATTGCTTAGAACCCTAGATTTATCTTTAATGAACGAGGGTGAGGAAGGAAACAAAGTAGATTATGATGATGATGATCCCTTTCCGTACTTTAGATTCACAAATTGCATGAACTTGGATGAACAATCAATCAAAGCTGTTGAGGCAAAAGTGCTACTTGAGATAAATAAAGCCATTTATGGCATCGCTATAATGGAATATCCAGGAACACGAGTTCCAAAATGGTTCATGTATAGGACCACAAAATATTTGGTAACTGTGGATCTCAGCTCAATTCCACAACCTTGGTATGACAGTTCTATTTTCCGCGCCGTCACTTCTAGATCGCCACCAGGGACTTGCATTGATGCCACATGGTATATTGATGGTGAATATGCTTGCTGGGCTGAAAGCTCCTTTGGTACAGATGAGTTCACCTTGTCAGATCATGTTTTTCTTTGGTATGATCAATATTCTTTTGGAGCAATACAAAGGAAAATTGGAGAAAAGAAAAAAGGTGCTCAGTACAACACTTATTATCCATTGCTTGAAATAGAATTCACAGCTAGATGTTGGAAGTCTTCGTATTGTGGAAAAATAGGAGAGATCAAACAATTTGGGGTGTGCCCGACATCTGCATTTGAATATCAAAATTAA 1671 0.3788 MATVKSLFYKGSNNVQFIGIWGMGGIGKTTLAKALFNKLCFAYEGFCFLANLREESKKYGIDTLKKKLILRLLRHKKSHIGIVDAISPYAMSRLGWEKSFNALDDVDDHEQLEHLAGRHDWFGLGSKILITTRDKQVLGRKVDGIYKLEALNSNEAFQLFSLNAFRKDCSDPKVRMLAMDVTYYGNGNPLALKGSEANEGITLNVSEVEDMCPSLQAFCLMPNLSQTIALGRISLKSLPTTFKVENLIEIGMPNGNLTKLWKEVQVRASEVLWLKDCSNLSELPDNIRLLTSLRVLELSRTNIETLPLSIKHLSSLHDIYLDGCKKLQSLPELPPSLLTLSTRSCRLLRTLDLSLMNEGEEGNKVDYDDDDPFPYFRFTNCMNLDEQSIKAVEAKVLLEINKAIYGIAIMEYPGTRVPKWFMYRTTKYLVTVDLSSIPQPWYDSSIFRAVTSRSPPGTCIDATWYIDGEYACWAESSFGTDEFTLSDHVFLWYDQYSFGAIQRKIGEKKKGAQYNTYYPLLEIEFTARCWKSSYCGKIGEIKQFGVCPTSAFEYQN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3223g00009 556 PRINTS Disease resistance protein signature 93 107 - -
Pral3223g00009 556 PRINTS Disease resistance protein signature 17 32 - -
Pral3223g00009 556 PRINTS Disease resistance protein signature 288 304 - -
Pral3223g00009 556 Gene3D - 1 143 IPR027417 -
Pral3223g00009 556 Gene3D Ribonuclease Inhibitor 192 358 IPR032675 -
Pral3223g00009 556 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 223 352 IPR044974 GO:0006952
Pral3223g00009 556 Pfam NB-ARC domain 7 193 IPR002182 GO:0043531
Pral3223g00009 556 SUPERFAMILY L domain-like 210 354 - -
Pral3223g00009 556 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 219 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3223g00009 Pral-Chr3223 169598 172719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3223g00009 221 341 WRKY Transcription Factor Family AT5G45050 28.455 1.50e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3223g00009 - - pcin:129291693 347.051