Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3218g00004 ATGTCTGCAAATCAGACCCTTGGGACTTGCCAGGGGGGCTTACTCTGTACAGGTGATATGGAACAGGAGAGATATTTCTTCAGTACCAGAGAAGCTAAATACTCTAATGGAAGCCGATCCAACAGAGCTACACATTCTGGGTATTGGAAAGCCACTGGTTTGGACAAGCAAATTCTGACTTCAAAGGGAAATCAAGTCGTGGGCATGAAGAAGACTCTGGTTTTCTACAGAGGCAAGCCTCCTCATGGGTCTAGAACCGACTGGATCATGCATGAATATCGCCTTCACAATATACAGAGCTCGGCGGTGGGGATGCAGAACTGGGTACTTTGTCGCATATTCTTGAAGAGAAGAAGCACGAATGTGAAGAGTGAAGAACAGAGTAGTTTCAGAGTGAGGAGGGATATGAACAGATCAAGGCCTGTGTTTTATGACTTCTTAGCACAGAACGAGAATGCGACTACTGATTTGAATCGTACACCTACGTCGTCCACGTCAAGCATCAGCGGAATCACACATCTCTCTTCTCATGAATCTGATGAGCGTGAGGAAAGCAGTAGTTGCAACAGCTTGCCGTCTCTTGCAAGAAACCCGTGA 597 0.464 MSANQTLGTCQGGLLCTGDMEQERYFFSTREAKYSNGSRSNRATHSGYWKATGLDKQILTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNIQSSAVGMQNWVLCRIFLKRRSTNVKSEEQSSFRVRRDMNRSRPVFYDFLAQNENATTDLNRTPTSSTSSISGITHLSSHESDEREESSSCNSLPSLARNP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3218g00004 198 MobiDBLite consensus disorder prediction 154 174 - -
Pral3218g00004 198 SUPERFAMILY NAC domain 21 116 IPR036093 GO:0003677|GO:0006355
Pral3218g00004 198 Gene3D NAC domain 8 121 IPR036093 GO:0003677|GO:0006355
Pral3218g00004 198 Pfam No apical meristem (NAM) protein 20 95 IPR003441 GO:0003677|GO:0006355
Pral3218g00004 198 MobiDBLite consensus disorder prediction 154 198 - -
Pral3218g00004 198 ProSiteProfiles NAC domain profile. 1 116 IPR003441 GO:0003677|GO:0006355
Pral3218g00004 198 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3218g00004 Pral-Chr3218 116474 117635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3218g00004 18 191 NAC Transcription Factor Family AT5G13180 53.846 2.87e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3218g00004 NAM 1.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3218g00004 - - qsa:O6P43_023807 227.639