Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3218g00003 ATGTCTGCAAATCAGACCCTTGGGACTTGCCAGGGGGGCTTACTCTGTACAGGTGATATGGAACAGGAGAGATATTTCTTCAGTACCAGAGAAGCTAAATACTCTAATGGAAGCCGATCCAACAGAGCTACACATTCTGGGTATTGGAAAGCCACTGGTTTGGACAAGCAAATTCTGACTTCAAAGGGAAATCAAGTCGTGGGCATGAAGAAGACTCTGGTTTTCTACAGAGGCAAGCCTCCTCATGGGTCTAGAACCGACTGGATCATGCATGAATATCGCCTTCACAATAGCTCGGCGGTGGGGATGCAGAACTGGGTACTTTGTCGCATATTCTTGAAGAGAAGAAGCACGAATGTGAAGAGTGAAGAACAGAGTAGTTTCAGAGTGAGGAGGGATATGAACAGATCAAGGCCTGTGTTTTATGACTTCTTAGCACAGAACGAGAATGCGACTACTGATTTGAATCGTACACCTACGTCGTCCACGTCAAGCATCAGCGGAATCACACATCTCTCTTCTCATGAATCTGATGAGCGTGAGGAAAGCAGTAGTTGCAACAGCTTGCCGTCTCTTGCAAGAAACCCGTGA 591 0.4653 MSANQTLGTCQGGLLCTGDMEQERYFFSTREAKYSNGSRSNRATHSGYWKATGLDKQILTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNSSAVGMQNWVLCRIFLKRRSTNVKSEEQSSFRVRRDMNRSRPVFYDFLAQNENATTDLNRTPTSSTSSISGITHLSSHESDEREESSSCNSLPSLARNP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3218g00003 196 MobiDBLite consensus disorder prediction 152 172 - -
Pral3218g00003 196 Gene3D NAC domain 8 119 IPR036093 GO:0003677|GO:0006355
Pral3218g00003 196 SUPERFAMILY NAC domain 21 114 IPR036093 GO:0003677|GO:0006355
Pral3218g00003 196 MobiDBLite consensus disorder prediction 152 196 - -
Pral3218g00003 196 ProSiteProfiles NAC domain profile. 1 114 IPR003441 GO:0003677|GO:0006355
Pral3218g00003 196 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 170 - -
Pral3218g00003 196 Pfam No apical meristem (NAM) protein 20 95 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3218g00003 Pral-Chr3218 116468 117635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3218g00003 18 189 NAC Transcription Factor Family AT5G13180 53.846 9.20e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3218g00003 NAM 1.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3218g00003 - - qsa:O6P43_023807 224.942