Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3218g00002 ATGGAGAAGGAGAAGAAGCTGAGTTTTGTGAGAAATGGTGAGCTTAGATTACCACCTGGGTTTCGATTTCACCCAACAGACGAAGAACTTGTGGTCCAATACTTGAAGCGCAAGGTCTTGTCTTATCCTTTGCCTGCCTCAATCATCCCTGAGGTTCATGTCTGCAAATCAGACCCTTGGGACTTGCCAGGTGATATGGAACAGGAGAGATATTTCTTCAGTACCAGAGAAGCTAAATACTCTAATGGAAGCCGATCCAACAGAGCTACACATTCTGGGTATTGGAAAGCCACTGGTTTGGACAAGCAAATTCTGACTTCAAAGGGAAATCAAGTCGTGGGCATGAAGAAGACTCTGGTTTTCTACAGAGGCAAGCCTCCTCATGGGTCTAGAACCGACTGGATCATGCATGAATATCGCCTTCACAATAGCTCGGCGGTGGGGATGCAGAACTGGGTACTTTGTCGCATATTCTTGAAGAGAAGAAGCACGAATGTGAAGAGTGAAGAACAGAGTAGTTTCAGAGTGAGGAGGGATATGAACAGATCAAGGCCTGTGTTTTATGACTTCTTAGCACAGAACGAGAATGCGACTACTGATTTGAATCGTACACCTACGTCGTCCACGTCAAGCATCAGCGGAATCACACATCTCTCTTCTCATGAATCTGATGAGCGTGAGGAAAGCAGTAGTTGCAACAGCTTGCCGTCTCTTGCAAGAAACCCGTGA 729 0.4609 MEKEKKLSFVRNGELRLPPGFRFHPTDEELVVQYLKRKVLSYPLPASIIPEVHVCKSDPWDLPGDMEQERYFFSTREAKYSNGSRSNRATHSGYWKATGLDKQILTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNSSAVGMQNWVLCRIFLKRRSTNVKSEEQSSFRVRRDMNRSRPVFYDFLAQNENATTDLNRTPTSSTSSISGITHLSSHESDEREESSSCNSLPSLARNP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3218g00002 242 MobiDBLite consensus disorder prediction 198 218 - -
Pral3218g00002 242 ProSiteProfiles NAC domain profile. 17 160 IPR003441 GO:0003677|GO:0006355
Pral3218g00002 242 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 216 - -
Pral3218g00002 242 Gene3D NAC domain 26 165 IPR036093 GO:0003677|GO:0006355
Pral3218g00002 242 MobiDBLite consensus disorder prediction 198 242 - -
Pral3218g00002 242 Pfam No apical meristem (NAM) protein 18 141 IPR003441 GO:0003677|GO:0006355
Pral3218g00002 242 SUPERFAMILY NAC domain 10 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3218g00002 Pral-Chr3218 116204 117635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3218g00002 7 235 NAC Transcription Factor Family AT5G13180 58.800 2.49e-100 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3218g00002 NAM 1.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3218g00002 - - tcc:18608896 330.487