Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3218g00001 ATGGAGAAGGAGAAGAAGCTGAGTTTTGTGAGAAATGGTGAGCTTAGATTACCACCTGGGTTTCGATTTCACCCAACAGACGAAGAACTTGTGGTCCAATACTTGAAGCGCAAGGTCTTGTCTTATCCTTTGCCTGCCTCAATCATCCCTGAGGTTCATGTCTGCAAATCAGACCCTTGGGACTTGCCAGGTGATATGGAACAGGAGAGATATTTCTTCAGTACCAGAGAAGCTAAATACTCTAATGGAAGCCGATCCAACAGAGCTACACATTCTGGGTATTGGAAAGCCACTGGTTTGGACAAGCAAATTCTGACTTCAAAGGGAAATCAAGTCGTGGGCATGAAGAAGACTCTGGTTTTCTACAGAGGCAAGCCTCCTCATGGGTCTAGAACCGACTGGATCATGCATGAATATCGCCTTCACAATATACAGAGCTCGGCGGTGGGGATGCAGAACTGGGTACTTTGTCGCATATTCTTGAAGAGAAGAAGCACGAATGTGAAGAGTGAAGAACAGAGTAGTTTCAGAGTGAGGAGGGATATGAACAGATCAAGGCCTGTGTTTTATGACTTCTTAGCACAGAACGAGAATGCGACTACTGATTTGAATCGTACACCTACGTCGTCCACGTCAAGCATCAGCGGAATCACACATCTCTCTTCTCATGAATCTGATGAGCGTGAGGAAAGCAGTAGTTGCAACAGCTTGCCGTCTCTTGCAAGAAACCCGTGA 735 0.4599 MEKEKKLSFVRNGELRLPPGFRFHPTDEELVVQYLKRKVLSYPLPASIIPEVHVCKSDPWDLPGDMEQERYFFSTREAKYSNGSRSNRATHSGYWKATGLDKQILTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNIQSSAVGMQNWVLCRIFLKRRSTNVKSEEQSSFRVRRDMNRSRPVFYDFLAQNENATTDLNRTPTSSTSSISGITHLSSHESDEREESSSCNSLPSLARNP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3218g00001 244 MobiDBLite consensus disorder prediction 200 220 - -
Pral3218g00001 244 Gene3D NAC domain 26 167 IPR036093 GO:0003677|GO:0006355
Pral3218g00001 244 ProSiteProfiles NAC domain profile. 17 162 IPR003441 GO:0003677|GO:0006355
Pral3218g00001 244 MobiDBLite consensus disorder prediction 200 244 - -
Pral3218g00001 244 Pfam No apical meristem (NAM) protein 18 141 IPR003441 GO:0003677|GO:0006355
Pral3218g00001 244 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 218 - -
Pral3218g00001 244 SUPERFAMILY NAC domain 10 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3218g00001 Pral-Chr3218 116199 117635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3218g00001 7 237 NAC Transcription Factor Family AT5G13180 58.800 4.72e-101 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral3218g00001 NAM 1.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3218g00001 - - tcc:18608896 333.183