Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3216g00014 ATGGAACTTCTCAAAGAAGACACATTCGACGCTTCTTCCTCCTCCTCTTCTTGGTTGGAGGTGAGCTTGTTGAGCAGGGATCCAATAGTGTTACTGGCGTCGGAGCGACCCAAGAAGCGAGTGGGACGGAGGGTTTTCAAGGAGACGAGGCATCCCGTGTACAGAGGAGTGCGACAGAGGAACAAAGACAGGTGGGTTTGCGAGGTTTGTGTGCTGAACGGTGACACCAGGATTTGGCTCGGAACATATTCCACGGCGGAGATGGCCGCTCGTGCTCATGACGTGGCGGCTCTGGCTCTTTGTGGTAAATTGCCTTGCTTGAATTTCGCTGACTCCGCTTGGCGGTTGCCTCTACCGGAATCAACCAATGCGGCGGATATCAGACGTGAAGGATTTCGGGCAAACCTCCTGGTTGTCTCTGCACCACTACCTCCTTTATCACTAAGCGAACATTTAGGGGCCTTATCTGGTGATCTGGTATTCAAAGTTTGCCTTGATTTGGTACCGCTCTCGTGGCCCACACCAAAACAACGCTTTACTCCTAGATGTCTAGTCAACTACTATGCCTCAATGCATTTTGAGGAAAACCAGCTAGCTCTGGGTTCGAGTGGTATTTTGATGATTCAACAAGGTCCCCGGGAGTCCTTCGATGAATACCTAGACAGGTACATAAGGCTCTCTCGTTACTCTAACGACCTCTAA 702 0.5071 MELLKEDTFDASSSSSSWLEVSLLSRDPIVLLASERPKKRVGRRVFKETRHPVYRGVRQRNKDRWVCEVCVLNGDTRIWLGTYSTAEMAARAHDVAALALCGKLPCLNFADSAWRLPLPESTNAADIRREGFRANLLVVSAPLPPLSLSEHLGALSGDLVFKVCLDLVPLSWPTPKQRFTPRCLVNYYASMHFEENQLALGSSGILMIQQGPRESFDEYLDRYIRLSRYSNDL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3216g00014 233 CDD AP2 54 112 IPR001471 GO:0003700|GO:0006355
Pral3216g00014 233 ProSiteProfiles AP2/ERF domain profile. 53 110 IPR001471 GO:0003700|GO:0006355
Pral3216g00014 233 Pfam AP2 domain 52 102 IPR001471 GO:0003700|GO:0006355
Pral3216g00014 233 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 22 130 IPR045277 GO:0003700
Pral3216g00014 233 SMART rav1_2 53 116 IPR001471 GO:0003700|GO:0006355
Pral3216g00014 233 Gene3D AP2/ERF domain 53 111 IPR036955 GO:0003700|GO:0006355
Pral3216g00014 233 PRINTS Ethylene responsive element binding protein signature 76 92 IPR001471 GO:0003700|GO:0006355
Pral3216g00014 233 PRINTS Ethylene responsive element binding protein signature 54 65 IPR001471 GO:0003700|GO:0006355
Pral3216g00014 233 SUPERFAMILY DNA-binding domain 53 112 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3216g00014 Pral-Chr3216 667007 693144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3216g00014 30 129 AP2-EREBP Transcription Factor Family AT1G12610 71.000 1.22e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral3216g00014 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3216g00014 - - pcin:129312011 168.703