Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3216g00002 ATGGCTCGTTTTAATTTTGGTGAAACTCTATCCCTTGGAGGTTCAAACCATGGACTGGGCGACCTAGTTGCTCCGTTCAAAACCACTACGAGCTCCCTAAGGGTCTTCCTTCTACATGGAAACTTAGAGATATGCGTGAAAGAGGCTAGAAACCTGCCCAATTTAGACATGTTCCATCAGAAAATGGGGGATATGTTTTCCAGATTACCTGGAAAACTTGGTCAGAAAGTTCAAGGGCATATGTCCAATACAATCGTCACTAGTGACCCATACGTGACTGTATCTCTGGCGGGTGCTGTAATTGCAAGAACATTTGTGATCAAGAACGATGAGAACCCTACTTGGATGCAGCATTTCAATGTTCCCGTAGCTCATCATGCTGCAGAAGTACTTTTCGTGGTAAAAGACACCGACATTGTGGGCTCCCAAATCATGGGTGTGGTTGGAATTCCAGTGGAACAGTTATACAACGGCACAAAAGTTAAAGGGTCCTTTCCAATCCTTAATTTTAGTGGGAAACCTTGCAAAGATGGAGCAGTCTTGAGTTTATCCATTCAATACATTCCTTTTGATAAGGTTGCTGTTTATGGTCATGGAATGGGGGCAGGTCCTAGTTATGAAGGGGTTCCAGGTACATACTTTCCCCTTAGGAAGGGTGGTCGAGTTAGACTTTATCAGGACGCTCATGTTCATGGAGGCTCCCTTCTTCCTAATTTGAAGATGGAAGGTGGTGTGAGTTATGAGCATGGCAATTGCTGGCACGACATCTTTGAGGCAATAAGTCAGGCCCGACGATTAGTATACATTGTGGGGTGGTCTGTGTACTACAATGTTAGACTGGTTCGAGATGCTAGTGATGCTAAACCTTGCACTTTAGGTGATCTTCTCAAAATCAAATCACAAGAAGGTGTGAGAGTGTTACTACTTGTGTGGGACGATCCTACTTCCAGAAGCATGATAGGTGGATATAAAACGACTGGACTTATGAACACCCATGATGAGGACACTCTCAATTTTTTCAAGGGCTCTTCAGTTCAAGTTCTGCTCTGCCCACGTTCAGGTGGAAAAGGACATAGTTGGGTCAAACAACAGGAAGCTGGGACCATCTATACTCATCATCAGAAAACAGTCATTGTGGATGCTGATGCAGGCCACCATAAAAGAAAGATTATATCTTTTATTGGAGGTCTTGATTTATGTGATGGCCGATATGATACACCACAACATCCTCTCTTCAGCACGTTGCAGACAACACACAAAGATGACTATCATAACCCTAACTTTGTGGGGCCTGTTGATGGTTGTCCAAGACAGCCGTGGCATGATTTGCACTCGCTAATTGATGGTCCAGCTGCTTATGACATCCTCACCAATTTTGAGGAGCGTTGGTTAAAGGCATCAAAATTGCATGGACTTAAAAAGATAAAAGGCTCACATGATGATTCATTACTTAAAATTGATAGAATCTCTGATATCCTTGGTATTGCTGATGTTTCATGCTCGAATGATAATAATCCAGAAGCTTGGCATGTCCAGGTCTTTCGTTCTATTGATTCCAATTCCGTCAAAGGATTTCCCAAGGATCCTACAGATGCTATAAAAAAGAACTTGGCTTGTGGAAAGAATGTACTGATAGACATGAGCATACATTCTGCATATGTCAAAGCTATCAGATCTGCCCAAAAGTTCATCTATATCGAGAACCAATACTTTCTAGGCTCATCATATAATTGGGATTCTCACAAAGACATAGGTGCAAACAATTTAATTCCCATGGAAATTGCTCTTAAAATAGCAGCCAAAATCAAACAACACGAGAGATTCGCCGCTTACATTGTCATTCCTATGTGGCCTGAAGGTGTGCCAACAAGTACAGCTACTCAGAGGATTCTCTTTTGGCAGTATAAAACAATGCAAATGATGTACGAGACAGTTTACAAGGCCTTGCAGGAGGCTGGACTTGACAATGAGTATGAACCACAGGATTACTTAAATTTCTTTTGCCTCGGCAATCGTGAGGCCCCAGAAAACCAAAACATTGTAATTGCTAGAAATCCTGCTGGATCAAACACTCCTCAACCGCAGGCACTAACCCAAAAAAACCGGCGATTCATGATTTACGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTCATAATGGGATCTGCAAACATCAACCAACGATCCATGGAAGGAACCAGAGACACAGAGATAGCAATGGGGGCATATCAGCCTCATCATTCTTGGGCAAGCAAGCGCTCTAGACCTCATGGACAGGTGTATGGATATAGAATGTCACTATGGGTTGAACATATTGGAGGCATTGAGGAATGCATGAAGGAACCAGAGAGTGTTGAATGCGTGAGACGGGTCAGGCGCTTGGGCGAGCAAAACTGGCGAGATTACACAGCTGAAGAGGTAACAGATATGAAGGGGCATTTATTGAAATACCCACTTGAAGTTGATTCAATGGGGAAGGTGAAGCCTCTTCCTAGCTGCGAGACATTTCCTGATCTTGGTGGAAACATCAATGGCAGTTTTACTCTCATTCAAGAAAATCTCACAATTTGA 2577 0.428 MARFNFGETLSLGGSNHGLGDLVAPFKTTTSSLRVFLLHGNLEICVKEARNLPNLDMFHQKMGDMFSRLPGKLGQKVQGHMSNTIVTSDPYVTVSLAGAVIARTFVIKNDENPTWMQHFNVPVAHHAAEVLFVVKDTDIVGSQIMGVVGIPVEQLYNGTKVKGSFPILNFSGKPCKDGAVLSLSIQYIPFDKVAVYGHGMGAGPSYEGVPGTYFPLRKGGRVRLYQDAHVHGGSLLPNLKMEGGVSYEHGNCWHDIFEAISQARRLVYIVGWSVYYNVRLVRDASDAKPCTLGDLLKIKSQEGVRVLLLVWDDPTSRSMIGGYKTTGLMNTHDEDTLNFFKGSSVQVLLCPRSGGKGHSWVKQQEAGTIYTHHQKTVIVDADAGHHKRKIISFIGGLDLCDGRYDTPQHPLFSTLQTTHKDDYHNPNFVGPVDGCPRQPWHDLHSLIDGPAAYDILTNFEERWLKASKLHGLKKIKGSHDDSLLKIDRISDILGIADVSCSNDNNPEAWHVQVFRSIDSNSVKGFPKDPTDAIKKNLACGKNVLIDMSIHSAYVKAIRSAQKFIYIENQYFLGSSYNWDSHKDIGANNLIPMEIALKIAAKIKQHERFAAYIVIPMWPEGVPTSTATQRILFWQYKTMQMMYETVYKALQEAGLDNEYEPQDYLNFFCLGNREAPENQNIVIARNPAGSNTPQPQALTQKNRRFMIYVHSKGMIVDDEYVIMGSANINQRSMEGTRDTEIAMGAYQPHHSWASKRSRPHGQVYGYRMSLWVEHIGGIEECMKEPESVECVRRVRRLGEQNWRDYTAEEVTDMKGHLLKYPLEVDSMGKVKPLPSCETFPDLGGNINGSFTLIQENLTI 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3216g00002 858 PANTHER PHOSPHOLIPASE D 32 847 IPR015679 -
Pral3216g00002 858 Pfam Phospholipase D Active site motif 369 403 IPR001736 GO:0003824
Pral3216g00002 858 Pfam Phospholipase D C terminal 778 848 IPR024632 -
Pral3216g00002 858 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 190 IPR035892 -
Pral3216g00002 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 368 403 IPR001736 GO:0003824
Pral3216g00002 858 SMART C2_3c 41 164 IPR000008 -
Pral3216g00002 858 CDD C2_plant_PLD 35 188 - -
Pral3216g00002 858 PIRSF PLD_plant 27 858 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pral3216g00002 858 Gene3D Endonuclease Chain A 509 752 - -
Pral3216g00002 858 ProSiteProfiles C2 domain profile. 22 165 IPR000008 -
Pral3216g00002 858 SUPERFAMILY Phospholipase D/nuclease 214 468 - -
Pral3216g00002 858 Pfam C2 domain 40 167 IPR000008 -
Pral3216g00002 858 FunFam Phospholipase D delta 243 482 - -
Pral3216g00002 858 Gene3D C2 domain 36 174 IPR035892 -
Pral3216g00002 858 SUPERFAMILY Phospholipase D/nuclease 548 742 - -
Pral3216g00002 858 Gene3D Endonuclease Chain A 241 483 - -
Pral3216g00002 858 SMART pld_4 368 403 IPR001736 GO:0003824
Pral3216g00002 858 SMART pld_4 704 731 IPR001736 GO:0003824
Pral3216g00002 858 FunFam Phospholipase D 516 750 - -
Pral3216g00002 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 704 731 IPR001736 GO:0003824
Pral3216g00002 858 Pfam PLD-like domain 706 740 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3216g00002 Pral-Chr3216 66988 71989 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3216g00002 32 858 Phospholipase D Gene Family (Wang group) AT2G42010 69.918 0.0 1275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3216g00002 K01115 - gmx:100786241 1394.02