Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3214g00004 ATGTCTTCTGATCTTTATGCCTTTGAAGCTCCTTTCCACATTCCTTCAAACCCAGAATTCCTCTCCAATGGAAGCCAGGACCTTCCCTTTCTTTCCTCTGCACCTTGCCATTTGCCACTTCACCAAGAAGAAGAAGAATGCCCTTCTTTCTTTTCCTTCTCACCTCCAAGCACGTTCCTTCGAAATCTTAGCCTTCACCATTCCAAAACCATCCTACCTGATCTAACAAACCCAGAAACAGAGTTCAGAAATTCCTCTGTTCTTCGCGGCAATAACGTAAAATGCAACATTTTTCCCAGTTCGGATTATAGTCATAATCAGAACTTAGTTTGCAAGAGTTACAGGAACGGAGATTCTGAAAATGTGGCCGAATTCATCATGCAAAGGAGCTTAAGCAGTAAATCCTTTGACGGGAAACCCAGTTTTCTCTTCCCAAATCATCTCTATGAAACTTCATTTATCCAAAGCCATGCCTTGAGCCCACCAGATCACACTTTCTTCGCTCCTCAAATGAGAAAAGTCTGCAGTACAGGAGATTTGCAGAATATCCAAGAAACTCAGACCTCACACACTGAAGAAACAAGCTTCAAAGTTGGACGTTACAGTGCACAAGAAAAGAAGGAGAAAATCTCTAAATATAGAGCCAAGAGAAGCCAGAGGAACTTCAACAAAACCATCAAATATACATGCAGAAAGACACTGGCTGATAATAGACCTCGCATACGTGGAAGATTCGCAAGAAACGACGAGACCATTGAGATTGCAAATCCTAAGGCAACATTTTCAACCAGAGATGAAGATGAAGATGTTTTCTGGATTGAAGGGTTGAATGAAGAGGTAGAGGATGAAACAGTGAGAGCACAACAGTATGTGAATAGCTTTGGAGTTTACTCAGGGTTTCAGTGCTACGGACTTTGA 918 0.4183 MSSDLYAFEAPFHIPSNPEFLSNGSQDLPFLSSAPCHLPLHQEEEECPSFFSFSPPSTFLRNLSLHHSKTILPDLTNPETEFRNSSVLRGNNVKCNIFPSSDYSHNQNLVCKSYRNGDSENVAEFIMQRSLSSKSFDGKPSFLFPNHLYETSFIQSHALSPPDHTFFAPQMRKVCSTGDLQNIQETQTSHTEETSFKVGRYSAQEKKEKISKYRAKRSQRNFNKTIKYTCRKTLADNRPRIRGRFARNDETIEIANPKATFSTRDEDEDVFWIEGLNEEVEDETVRAQQYVNSFGVYSGFQCYGL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3214g00004 305 ProSiteProfiles CCT domain profile. 206 248 IPR010402 GO:0005515
Pral3214g00004 305 Pfam CCT motif 207 248 IPR010402 GO:0005515
Pral3214g00004 305 Coils Coil 273 293 - -
Pral3214g00004 305 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 88 264 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3214g00004 Pral-Chr3214 371605 373040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3214g00004 202 251 C2C2-CO-like Transcription Factor Family AT5G57660 48.000 6.26e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral3214g00004 CCT 2.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3214g00004 - - qsu:112017226 250.366