Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral320g00014 ATGGCCCAACATAACATTTTCATATTCTTTCTATTTCCTCTCCCTTGCTTAGTCTTTTTGCCACTGTGCTCCATCACTTCGGGACTTACAGAAACTGAAGCTCTTCTCAAGTGGAAACGAAGTCTCCCGAACCAAAAATTTTTGGATTCATGGGTCTCTCCACCACTAGCTAACTCTAGTAGAGCTCAAATCCCATGTTCATGGCGTGGAATTAGTTGTGATTCTTCAGGCAGCGTGATTGAACTAAACTTGAACAACACTGGTCTTCAAGAAAGCATTGGAGTGCTCTCAAAGCTCCAATTTCTGTCTCTAGATAAAAACAACTTTTCTGGGTCTATACCCCAATCTCTAGGTAACTGTACACATCTAAGTGTTCTCTCAGTGGCTTTAAACAATCTCTCAGGCATAATTCCACCTGGTATTGGCAGATTGACCAATCTAACTGATGTTCGCTTTCATCGTAACAATTTACATGGTGATTTGCCACAAGAGCTTGGAAATGTTTCATCTTTGATAGTAGTTCATCTATCCTACAACAACTTCAGTGGCCATTTACCACCTCAAGTGTGCAAAGGTGGTAAGCTTGTGAATTTCACTGCAGCCTATAATAGTCTCTCTGGTCCAATACCAATAAGTTTGAGAAACTGTTCATCTTTATACAGAGTTCAAATTCAACATAACAAGTTGACAGGTTATGCAGATCAGGATTTTGGAGTTTATCCAAATCTCACTTACATTGACATTAGTCTCAACAGAGTGCAAGGTGAGCTCTCTGCAAATTGGGGTGCCTGCAAAAGCTTAGAAGCTCTTATCATGGCTGGCAATTCAATCAAGGGAAATATTCCTGGTGAGGTGTTTCAATTGAAACAACTACAAAAGCTTGACTTGTCATCGAACCAAATATCCGGCGAGATTCCAACAGAAATCAGGAATGCCTCCATGTTATACCTTCTAAACTTAAATAGAAACAATATTTCAGGTATGATGCCTGCAAGCATTGGAAGTCTTTCTAATTTGGAGTCATTAGACCTGTCAATGAATAGGCTTAGTGGACCCATCGCTTATCAATTAGGGAATTGCTACAGGCTGCTCAATTTAAATTTGAGTCATAATGACTTCAATGGACGAATCCCAAATCAAATAGGGAATCTTTACTCCTTAGAAGATTTTCTGGACTTGAGTTTTAATTCACTTTCTGGAGAAATCCCTATTGATCTTAGTAAATTCAACAACTTGATAAGTCTGAATCTGTCTCATAATAATTTATCAGGTTCTATCCCTGATTCTCTTAGGACAATGTTGAGCTTGTCAAGCATCATCCTCTCTTACAACGATTTGGAGGGTCCTGTACCTAACGGTGGCATATTTAATAGTTCTTATCAATTAGATCTGAGTAATAACAAAGATCTATGTGGGAGAATCCAAGGTTTGAGACCTTGCAATATTTCAGTATCACACGGGGGAAGCAGCAAGGGCAAAGTTGTGATATCTATTGTTGCTTCTTTAGCAGGTGTACTACTTGTTTCATTGGTGTTAGTTGGGATTTTTGTTATTTGCTCAGAAAGAAACTCAAGAATTTTAGAACAGAATTCAGGAATCAAGAAGGAAAGCACATTTTCAATTTTACATTTTGATGGGAAAAATCTGTATGATGACATAATTGAAGCAACTGAGAACTTTGATGACAAGTATTGTATAGGGGAAGGAGCTTCTGGAAAAGTTTACAAAATGGTCATGCAAGGAGGTGAAAAATTTGCTATAAAGAAGTTTAGATGTGAAGAATATGAGTTAGATCTCGAGATTTTAAAAGCCTTCAAAAGTGAGATTGAAGCCATGACAGAAATCCGCCATCGAAACATTGTGAAGCTCCACGGGTTTTGCTCACAAAGATCACACACTTTTGCTGTTTATGAGTACATGGAAGGTGGGACTTTAGCCGATTTTCTGAAAAGTGACACAAAGGCATTAAAGTTAGATTGGCTTAAGAGGGTGGATATTGTCAAAGGTGTAGCACAAGCTTTATCATATATGCATCATGATTGTGATCCACCAATTATTCATAGAGACATATCAAGCAAAAATATATTATTATCTGCAAATCTTGAAGCCCATATCTCAGACTTTGGCACAGCAAGGTTCTTGAAGCTCAATTCATCAATTTGGACAGCGTTTGCTGGCACACGTGGCTATGCTGCTCCAGAGCTAGCATACACAATGGCAGTGTCTGAGAAATGTGATGTGTTTAGCTTTGGTGTGTTGGCTTTTGAAATTCTCATGGGAAAGCATCCTGGTGATCTAATTTCTCATTTACAATCCTTTGATGATGTTCCAAATATGAACTTCAAAGAGATTCTAGACCCACGTCTATCACCTCCCAAAGAGCAGCAAAAGTTGATGAAGGAAGTGGTTTTGATTGCAAGTATTGCTATTTCATGTTTACAAACCAACCCTTCATCTCGACCAACCATGCGAAGCATTGCTGATCAGATGATTTCAAGTTTATGTTAG 2508 0.3848 MAQHNIFIFFLFPLPCLVFLPLCSITSGLTETEALLKWKRSLPNQKFLDSWVSPPLANSSRAQIPCSWRGISCDSSGSVIELNLNNTGLQESIGVLSKLQFLSLDKNNFSGSIPQSLGNCTHLSVLSVALNNLSGIIPPGIGRLTNLTDVRFHRNNLHGDLPQELGNVSSLIVVHLSYNNFSGHLPPQVCKGGKLVNFTAAYNSLSGPIPISLRNCSSLYRVQIQHNKLTGYADQDFGVYPNLTYIDISLNRVQGELSANWGACKSLEALIMAGNSIKGNIPGEVFQLKQLQKLDLSSNQISGEIPTEIRNASMLYLLNLNRNNISGMMPASIGSLSNLESLDLSMNRLSGPIAYQLGNCYRLLNLNLSHNDFNGRIPNQIGNLYSLEDFLDLSFNSLSGEIPIDLSKFNNLISLNLSHNNLSGSIPDSLRTMLSLSSIILSYNDLEGPVPNGGIFNSSYQLDLSNNKDLCGRIQGLRPCNISVSHGGSSKGKVVISIVASLAGVLLVSLVLVGIFVICSERNSRILEQNSGIKKESTFSILHFDGKNLYDDIIEATENFDDKYCIGEGASGKVYKMVMQGGEKFAIKKFRCEEYELDLEILKAFKSEIEAMTEIRHRNIVKLHGFCSQRSHTFAVYEYMEGGTLADFLKSDTKALKLDWLKRVDIVKGVAQALSYMHHDCDPPIIHRDISSKNILLSANLEAHISDFGTARFLKLNSSIWTAFAGTRGYAAPELAYTMAVSEKCDVFSFGVLAFEILMGKHPGDLISHLQSFDDVPNMNFKEILDPRLSPPKEQQKLMKEVVLIASIAISCLQTNPSSRPTMRSIADQMISSLC 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral320g00014 835 ProSiteProfiles Leucine-rich repeat profile. 290 312 IPR001611 GO:0005515
Pral320g00014 835 Gene3D Phosphorylase Kinase; domain 1 518 639 - -
Pral320g00014 835 FunFam MDIS1-interacting receptor like kinase 2 640 834 - -
Pral320g00014 835 ProSitePatterns Tyrosine protein kinases specific active-site signature. 685 697 IPR008266 GO:0004672|GO:0006468
Pral320g00014 835 ProSiteProfiles Protein kinase domain profile. 560 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral320g00014 835 ProSitePatterns Protein kinases ATP-binding region signature. 566 589 IPR017441 GO:0005524
Pral320g00014 835 SUPERFAMILY Protein kinase-like (PK-like) 540 828 IPR011009 -
Pral320g00014 835 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 173 484 - -
Pral320g00014 835 SUPERFAMILY RNI-like 137 470 - -
Pral320g00014 835 Pfam Protein kinase domain 563 828 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral320g00014 835 FunFam Nuclear pore complex protein NUP107 29 172 - -
Pral320g00014 835 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Pral320g00014 835 SMART LRR_typ_2 336 360 IPR003591 -
Pral320g00014 835 SMART LRR_typ_2 288 312 IPR003591 -
Pral320g00014 835 SMART LRR_typ_2 168 192 IPR003591 -
Pral320g00014 835 SMART LRR_typ_2 409 433 IPR003591 -
Pral320g00014 835 SMART LRR_typ_2 96 120 IPR003591 -
Pral320g00014 835 PANTHER LEUCINE RICH REPEAT KINASE 2 32 831 - -
Pral320g00014 835 PRINTS Leucine-rich repeat signature 336 349 - -
Pral320g00014 835 PRINTS Leucine-rich repeat signature 291 304 - -
Pral320g00014 835 Gene3D Ribonuclease Inhibitor 93 236 IPR032675 -
Pral320g00014 835 Gene3D Ribonuclease Inhibitor 25 92 IPR032675 -
Pral320g00014 835 Gene3D Ribonuclease Inhibitor 237 486 IPR032675 -
Pral320g00014 835 FunFam Leucine-rich repeat receptor protein kinase MSP1 522 639 - -
Pral320g00014 835 Gene3D Transferase(Phosphotransferase) domain 1 640 834 - -
Pral320g00014 835 ProSiteProfiles Leucine-rich repeat profile. 411 433 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral320g00014 Pral-Chr320 206298 209300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral320g00014 93 733 Receptor kinase-like Gene Family AT4G08850 45.075 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral320g00014 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral320g00014 - - gmx:100814345 976.081