Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3201g00100 ATGGAAGTCGGCCATTTCTGTTTTGTTCTGGTTCTGTCGTCTCGTGGGGGCCAAATGCAGGAGCAAGCTACAAGTTCTATTGCCGCAAGCTCTCTGCCTTCGAGCAGTGAGAAGTCTTCAAGTTCTGCTCTCCATGTTGAAGTAAAAGAAGGTATTGAGAGTGACGAGGAGATCAGACGGGTGCCGGAGATCGGCGTTGAGACCGCTGGACCGTCAGCGTCTCGTCCAGACTCCGGTTCAGGTGCGGCTACAGACCGGGTTCAAGGGGCAGGGGAGGGCCAAAGGAAGAGAGGGAGAAACTCAGCTGACAAAGAAAGCAAGCGGCTAAAGAGTGGTGGGGTATGTAAATGGAATAGGCTTCTGAGGAACAGAGTTTCAGCGCAGCAAGCTAGGGAAAGGAAGAAGGCATACCTGATTGATTTGGAAACCAGGGTTAAAGACTTGGAGAAGAAGAATTCAGAGCTGGAAGAGAGGCTGTCCACTTTACAGAACGAGAATCAGATGCTTAGACATATACTGAAGAACACGACGGCAAGCAGGAGAGGAGGCACTGGTGCTGAAGGAACCATGTGA 573 0.5113 MEVGHFCFVLVLSSRGGQMQEQATSSIAASSLPSSSEKSSSSALHVEVKEGIESDEEIRRVPEIGVETAGPSASRPDSGSGAATDRVQGAGEGQRKRGRNSADKESKRLKSGGVCKWNRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELEERLSTLQNENQMLRHILKNTTASRRGGTGAEGTM 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3201g00100 190 Gene3D Single helix bin 134 175 - -
Pral3201g00100 190 Pfam bZIP transcription factor 119 172 IPR004827 GO:0003700|GO:0006355
Pral3201g00100 190 SUPERFAMILY Leucine zipper domain 116 173 IPR046347 GO:0003700|GO:0006355
Pral3201g00100 190 SMART brlzneu 111 175 IPR004827 GO:0003700|GO:0006355
Pral3201g00100 190 Coils Coil 131 172 - -
Pral3201g00100 190 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 22 183 IPR044280 GO:0000981|GO:0045944
Pral3201g00100 190 MobiDBLite consensus disorder prediction 48 63 - -
Pral3201g00100 190 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 119 133 IPR004827 GO:0003700|GO:0006355
Pral3201g00100 190 MobiDBLite consensus disorder prediction 90 109 - -
Pral3201g00100 190 MobiDBLite consensus disorder prediction 22 109 - -
Pral3201g00100 190 FunFam Transcription factor HY5 134 175 - -
Pral3201g00100 190 CDD bZIP_HY5-like 119 167 - -
Pral3201g00100 190 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 116 176 IPR004827 GO:0003700|GO:0006355
Pral3201g00100 190 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3201g00100 Pral-Chr3201 457536 481550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3201g00100 19 172 bZIP Transcription Factor Family AT5G11260 72.903 9.80e-56 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral3201g00100 bZIP_1 3.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3201g00100 K16241 - csav:115711038 232.261