Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3201g00098 ATGCAGGAGCAAGCTACAAGTTCTATTGCCGCAAGCTCTCTGCCTTCGAGCAGTGAGAAGTCTTCAAGTTCTGCTCTCCATGTTGAAGTAAAAGAAGGTATTGAGAGTGACGAGGAGATCAGACGGGTGCCGGAGATCGGCGTTGAGACCGCTGGACCGTCAGCGTCTCGTCCAGACTCCGGTTCAGGTGCGGCTACAGACCGGGTTCAAGGGGCAGGGGAGGGCCAAAGGAAGAGAGGGAGAAACTCAGCTGACAAAGAAAGCAAGCGGCTAAAGAGTGGTGGGGTATGTAAATGGAATAGGCTTCTGAGGAACAGAGTTTCAGCGCAGCAAGCTAGGGAAAGGAAGAAGGCATACCTGATTGATTTGGAAACCAGGGTTAAAGACTTGGAGAAGAAGAATTCAGAGCTGGAAGAGAGGCTGTCCACTTTACAGAACGAGAATCAGATGCTTAGACATATACTGAAGAACACGACGGCAAGCAGGAGAGGAGGCACTGGTGCTGAAGGAACCATGTGA 519 0.5106 MQEQATSSIAASSLPSSSEKSSSSALHVEVKEGIESDEEIRRVPEIGVETAGPSASRPDSGSGAATDRVQGAGEGQRKRGRNSADKESKRLKSGGVCKWNRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELEERLSTLQNENQMLRHILKNTTASRRGGTGAEGTM 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3201g00098 172 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 98 158 IPR004827 GO:0003700|GO:0006355
Pral3201g00098 172 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 4 165 IPR044280 GO:0000981|GO:0045944
Pral3201g00098 172 Gene3D Single helix bin 116 157 - -
Pral3201g00098 172 Pfam bZIP transcription factor 101 154 IPR004827 GO:0003700|GO:0006355
Pral3201g00098 172 CDD bZIP_HY5-like 101 149 - -
Pral3201g00098 172 MobiDBLite consensus disorder prediction 72 92 - -
Pral3201g00098 172 MobiDBLite consensus disorder prediction 1 24 - -
Pral3201g00098 172 Coils Coil 113 154 - -
Pral3201g00098 172 SMART brlzneu 93 157 IPR004827 GO:0003700|GO:0006355
Pral3201g00098 172 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 101 115 IPR004827 GO:0003700|GO:0006355
Pral3201g00098 172 FunFam Transcription factor HY5 116 157 - -
Pral3201g00098 172 MobiDBLite consensus disorder prediction 30 45 - -
Pral3201g00098 172 SUPERFAMILY Leucine zipper domain 98 155 IPR046347 GO:0003700|GO:0006355
Pral3201g00098 172 MobiDBLite consensus disorder prediction 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3201g00098 Pral-Chr3201 457510 473977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3201g00098 1 154 bZIP Transcription Factor Family AT5G11260 72.903 3.20e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral3201g00098 bZIP_1 1.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3201g00098 K16241 - csav:115711038 232.261