Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3201g00088 ATGGAAAGTGTGTTGCACGGGACGCTTTTTGTGACCGTATATGATGTTGATAAGCTGCACAATAGATGTAACTTAGATTTTTGCAACAAGGATACACCTCACAAAGGGAAGAGATTTCTAGCCCAAGTGAAGGGTTGTGTGCTGTGTCGACCGGAGCTTGTTGGGACTAGACTGTATGCAACAGTTGATTTAGATAAAGCCAGAGTTGCGAGAACCAGAATGATACGACATCAAACCTCCAACCCCAAGTGGAATGAGACCTTTCGCATATATTGTGCCCACAAAGTGGCAAACATCATATTTACAGTCAAAGATGGAAATCCTATTGGAGCAACACTAATTGGAAGAGCATACGTTGCTGTAGATCAAGTTTTGGAGGGGGGCCCGCTAAACAGACAAGTTGAGATTTATGATGAAGACTTACGTCCGATACGAGGTGGCTCTAAAATACATGTCAAAATATCATTCGATCATGCGTTTAATGATCCATACTGGTCTAGAGGAATAAAGAGTGCAGATTTTTTTGGAGTTCCTCATGTATTCTTCAACCAGAGAGAAAATTGCAGAGTCACTTTGTACCAAGATGCCCATGTCCTTAGTGATTTTGCCAAGGTATCTATCCCACTGTCCGGGGCAATCAGATATTATAATCCAGGAAGATGTTGGGAGGACATTTTCAGTGCCATTTATAATGCTAAGTACTTGATTTATATAACTGGGTGGTCTGTTTACACTGAAATAACATTAACTAGGAACTTTGATAAGCCATCCATGACTCTGGGGGAGCTGCTCTTGAAGAAAGCCGATGAAGGAGTCAGAGTGCTTATGCTTGTTTGGGATGACAGAACTTCTGATGAACTCAGAAAAGTGGGTTTGATGGCAACCCATGATGAAGAAGAAACAGCACAGTACTTTAGGAATACTAAAGTAAAATGTGCCTTGTGCCCCAGAAATCCTGATGTTGGAAGGAGCATAATTCAAGGGCTTCAAACTTCAACTATGTTCACTCACCACCAAAAGGCAGTCGTTGTTGACTGTGGCTTACCTGACATTAATGAAGAGCTCAATGGAGGAACACACAAGAGGGCTGTTGTAAGTTTTATAGGCGGAATTGATCTGTGTGACGGGCGATATGATACGCATGAGCATCCTTTGTTTTCAACTCTAAACACAATCCATAAAGATGATTTCCATCAGCCAAACTTTCCAGGAGCTTCAATTAAGAAAGGTGGCCCAAGAGAGCCCTGGCATGACATTCATTGCAAACTAGAAGGGCCTGTTGCGTGGGATGTCTTGTACAATTTTGAGCAGAGGTGGGAGAAGCAAGTTGGTAGGGACTTCCTTATACCTCTTACTGTGCATGATGAGATTTTTGTCTCTCCGTCTGAAATAAAACCATTAGAAGACCATGAGACATGGACTGTTCAGTTGTTCAGGTCCATTGATGGTGGTGCCGTTTCTGGGTTTCCTGAAAACCAAGAAGAGGCAACCAAGTTAGGCCTTGTCAGTGGGAAAAATAACATCATTGATAGAAGCATTCAAGATGCTTACATAAATGCTATTAGGCGAGCCAAGAATTTCATATACATCGAAAACCAGTATTTCCTGGGGAGCTCATATGGCTGGAAATCAACTGATTTAAAACTTGGAGATATTGGAGCTCTGCATCTTATACCAAAGGAGCTGTCACTAAAGATTGTGAGCAAGATTAAAGCAAGACAGAGGTTTGCTGTGTACATTGTGATCCCAATGTGGCCAGAAGGTGATCCTGAGAGTGCTTCAGTTCAAGCAATATTAGACTGGCAAAGGAGGACAATGGAGATGATGTATACCGATATAGCTGAAGCCATTGAACAAGTAGAATCTAAAGCCGACCCCACAGACTACCTCAACTTTTTCTGCCTTGGGAATAGAGAGGTGGAGAAGCCTGGAGAATATGTTCCTCCAGAGAAACCAACGCCTGATTCTAACTATGATAGAGCACAAAAAGCCAGGCGCTTCATGATCTATGTTCATTCAAAGATGATGATAGTTGATGATGAGTATATAATAGTTGGCTCAGCCAACATAAACCAGAGATCAATGGATGGGGGAAGAGATACAGAAATTGCAATAGGGGCATTCCAACCGCATCATCTAACAGAGGAAGAGAGTCTGCCAAAAGGTCAGATACATGGATTCAGAAGGGCATTATGGCTTGAGCATCTTGGAGATATAGATGCTGAAATGTTGGACTATCCAGAAAATGAAGACTGTGTGAAGCTTGTGAATTTTATTGCTAAAGATAACTGGGAATTATACACAAAGGAAACATTCAATGAAGATGATTCAAGTCTATTTAAGCATCTCTTGCGTTACCCCGTTGATATAACAAAAGGTGGGGGAGTGGTTGCATTAAAAGGGTTTGAATTCTTTCCTGACACTAAGGCTCGTATTCTAGGTACCAAATCTGAGTACCTTCCTCCTTTGCTCACTACCTAG 2481 0.4184 MESVLHGTLFVTVYDVDKLHNRCNLDFCNKDTPHKGKRFLAQVKGCVLCRPELVGTRLYATVDLDKARVARTRMIRHQTSNPKWNETFRIYCAHKVANIIFTVKDGNPIGATLIGRAYVAVDQVLEGGPLNRQVEIYDEDLRPIRGGSKIHVKISFDHAFNDPYWSRGIKSADFFGVPHVFFNQRENCRVTLYQDAHVLSDFAKVSIPLSGAIRYYNPGRCWEDIFSAIYNAKYLIYITGWSVYTEITLTRNFDKPSMTLGELLLKKADEGVRVLMLVWDDRTSDELRKVGLMATHDEEETAQYFRNTKVKCALCPRNPDVGRSIIQGLQTSTMFTHHQKAVVVDCGLPDINEELNGGTHKRAVVSFIGGIDLCDGRYDTHEHPLFSTLNTIHKDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPVAWDVLYNFEQRWEKQVGRDFLIPLTVHDEIFVSPSEIKPLEDHETWTVQLFRSIDGGAVSGFPENQEEATKLGLVSGKNNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKSTDLKLGDIGALHLIPKELSLKIVSKIKARQRFAVYIVIPMWPEGDPESASVQAILDWQRRTMEMMYTDIAEAIEQVESKADPTDYLNFFCLGNREVEKPGEYVPPEKPTPDSNYDRAQKARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDTEIAIGAFQPHHLTEEESLPKGQIHGFRRALWLEHLGDIDAEMLDYPENEDCVKLVNFIAKDNWELYTKETFNEDDSSLFKHLLRYPVDITKGGGVVALKGFEFFPDTKARILGTKSEYLPPLLTT 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3201g00088 826 Pfam Phospholipase D C terminal 743 816 IPR024632 -
Pral3201g00088 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 156 IPR035892 -
Pral3201g00088 826 SMART pld_4 333 377 IPR001736 GO:0003824
Pral3201g00088 826 SMART pld_4 667 694 IPR001736 GO:0003824
Pral3201g00088 826 FunFam Phospholipase D 480 713 - -
Pral3201g00088 826 FunFam Phospholipase D delta 212 456 - -
Pral3201g00088 826 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 667 694 IPR001736 GO:0003824
Pral3201g00088 826 Gene3D C2 domain 5 163 IPR035892 -
Pral3201g00088 826 SUPERFAMILY Phospholipase D/nuclease 510 708 - -
Pral3201g00088 826 PIRSF PLD_plant 1 826 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pral3201g00088 826 SMART C2_3c 8 133 IPR000008 -
Pral3201g00088 826 Pfam C2 domain 8 134 IPR000008 -
Pral3201g00088 826 Gene3D Endonuclease Chain A 484 714 - -
Pral3201g00088 826 PANTHER PHOSPHOLIPASE D 4 814 IPR015679 -
Pral3201g00088 826 Pfam Phospholipase D Active site motif 333 377 IPR001736 GO:0003824
Pral3201g00088 826 Pfam Phospholipase D Active site motif 668 694 IPR001736 GO:0003824
Pral3201g00088 826 SUPERFAMILY Phospholipase D/nuclease 175 448 - -
Pral3201g00088 826 Gene3D Endonuclease Chain A 211 450 - -
Pral3201g00088 826 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Pral3201g00088 826 CDD C2_plant_PLD 4 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3201g00088 Pral-Chr3201 407456 410863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3201g00088 2 826 Phospholipase D Gene Family (Wang group) AT3G15730 61.649 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3201g00088 K01115 - qsa:O6P43_019442 1103.2