Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3201g00087 ATGTTGCATTTGTTGCATGGGACGCTTCATGTGATCATATATGATGTCGACAAGCTGCATTCTGGACTCAACTTCAGTAGTCTCAACAACCAGGGTGCAAGAAACTTTGGGAAGAAAGTTCTCACTCGAGTCAAGAGTGTTTTGCGATCCAAGCCTCAGATCGCTGGGACTAGAATGTATGCAACTGTTGATTTGGATAAAGCAAGGGTCGCGCGAACAAGAATGATACGCCAAACCTCTAAACCCAAATGGAATGAGAAATTTTATATATACTGTGCCCATTCCATTTCTGAGATTATATTCACTCTCAAATATGATAATCCCATTGGAGCAACTCTAATTGGAAGAGCTCATATACCCGTTGAGCAAGTCCTCAGAGGTAACATTGTGGATGCTTGGATTCCTATATTGGATGAGGATCGTCGTCCCATACAAGGTGGCTCTAAAACACATGTCAGCATACAGTTCTTTGATGTTACAAAGGATGTAACTTGGTCTCAAGGAATCAAAACCCCGCGATATGCAGGTGTTCCCCATACGTTTTTCACTCAGAAAGTTGGCTGCAAAGTTACTTTGTACCAAGATGCTCATGTCCCAAATGCTTATCTTCCGATGATTCGTTTGTCTGAAGGAAGATATTATGAACCTAGTAGATGTTGGGAGGACATTTTCCATGCAATCACAAATGCTAGGCACTTGATTTACATAACTGGGTGGTCTGTGTATACTGAAATAACATTGATAAGGGACCTAAGGGGACCAATTCCTAACATAACCCTTGGGGAACTTCTCAAGAAGAAAGCTGATGAAGGTGTTAATGTTCTTATGCTTGTGTGGGATGATAGAACTTCTGTTAAAGAGCTAAAGAAAGATGGGTTGATGGCAACCCATGATCAGGAAACAGAAGAGTATTTTAGGAACACAAAAGTAAAGTGTGTTTTGTGTCCACGTAACCCAGATGATGGACGTAGCATAATTCAAGGTTTTGAGATTTCAACAATGTTCACTCATCATCAAAAGACTGTGGTTGTTGATAGTGGAATTCCTGGTGAAGGATCTCAGAGGCGAAGGATAGTGAGTTTTATTGGTGGCATTGATTTGTGTGATGGGAGATATGACACACAAGAGCATCCTTTGTTCTCAACTCTAAACACAACCCATTATAATGATTTCCATCAGCCAAACTTCCCAGGAGCTTCAATCAAGAAAGGAGGCCCAAGAGAGCCATGGCATGATATTCATTGCAGATTAGAAGGGCCAGTGGCTTGGGATGTCTTGTTCAACTTTCAACAAAGGTGGGAGAAGCAAGTTGGGAAGCAATTCTTACTCCCTCCTAGCCTGCTTAATCGGATTTTAGTACCTCAATCTTATATAGAGACATCAAATGATAGAGATGCATGGACTGTTCAATTGTTCAGATCCATTGATGGTGGGGCAGCTTCTGGCTTCCCTCAAGACCCATCTAAAGCATGTGAGTTAGGCCTTGTTAGTGGGAAGGATAATGTCATTGACAGAAGTGTTCAGGATGGTTACATAAATGCCATTAGGCGAGCCAAGAACTTCATCTACATTGAAAACCAGTATTTCCTGGGGAGCTCATATGGTTGGAAAGAGGCCGACATAAAAGTTGAAGATATTGGAGCTCTACATCTAATACCAAAGGAGCTATCACTGAAGATTGTGAGCAAGATTGAAGCAAGAGAAAGGTTTGCAGTGTACATTGTGATCCCCATGTGGCCAGAAGGTATCCCCAAGAGTGGTTCAATTCAAGCAATATTGGATTGGCAAAGAAGAACAATGGAGATGATGTATACTGATATTGCTACAGCCATTCAGAGAAAAGGAATCAATGCCCACCCTAGAGATTACTTGTCATTTTTTTGCCTTGGAAATCGAGAGTATAAGAAACCTAAAGAATATGTTCCTCCAGAGAGACCAGATCCTGATAGTGATTATAGTAGAGCACAAAATGCCAGGCGCTTCATGATCTATGTTCATGCCAAGATGATGATAGTTGACGATGAATACATAATCATCGGTTCTGCCAACATAAACCAGAGATCAATGGATGGTGCAAGGGACAGTGAGATTGCAATGGGTGCGTTCCAACCATATTATCTTACATCTTATGGCCCACCCAGGGGTCAAATCTATGGGTTTAGACGAGCTTTATGGTACGAACATCTTGGAGTTCCTGATAAAGGTGATGAAGCCTTTGAATATCCAGAAAGTGAATATTGTGTGAAGCTTGTGAATTATCTTTCAGACTTGAACTGGGAAAAATATTCAAATCCAACATTTAATCCACAAAGTTCATTCAACCACCTCATGCGTTACCCTATAGACATAACCAAAGATGGCAATGTAACAAAACTACAAGAATTTGAATTCTTCCCTGACACTAAGGCTTCTGTTCTGGGCTCCAAATCAACCCTCCCTCCGATCCTCACCACTTAG 2457 0.4131 MLHLLHGTLHVIIYDVDKLHSGLNFSSLNNQGARNFGKKVLTRVKSVLRSKPQIAGTRMYATVDLDKARVARTRMIRQTSKPKWNEKFYIYCAHSISEIIFTLKYDNPIGATLIGRAHIPVEQVLRGNIVDAWIPILDEDRRPIQGGSKTHVSIQFFDVTKDVTWSQGIKTPRYAGVPHTFFTQKVGCKVTLYQDAHVPNAYLPMIRLSEGRYYEPSRCWEDIFHAITNARHLIYITGWSVYTEITLIRDLRGPIPNITLGELLKKKADEGVNVLMLVWDDRTSVKELKKDGLMATHDQETEEYFRNTKVKCVLCPRNPDDGRSIIQGFEISTMFTHHQKTVVVDSGIPGEGSQRRRIVSFIGGIDLCDGRYDTQEHPLFSTLNTTHYNDFHQPNFPGASIKKGGPREPWHDIHCRLEGPVAWDVLFNFQQRWEKQVGKQFLLPPSLLNRILVPQSYIETSNDRDAWTVQLFRSIDGGAASGFPQDPSKACELGLVSGKDNVIDRSVQDGYINAIRRAKNFIYIENQYFLGSSYGWKEADIKVEDIGALHLIPKELSLKIVSKIEARERFAVYIVIPMWPEGIPKSGSIQAILDWQRRTMEMMYTDIATAIQRKGINAHPRDYLSFFCLGNREYKKPKEYVPPERPDPDSDYSRAQNARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPYYLTSYGPPRGQIYGFRRALWYEHLGVPDKGDEAFEYPESEYCVKLVNYLSDLNWEKYSNPTFNPQSSFNHLMRYPIDITKDGNVTKLQEFEFFPDTKASVLGSKSTLPPILTT 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3201g00087 818 SUPERFAMILY Phospholipase D/nuclease 161 442 - -
Pral3201g00087 818 Gene3D Endonuclease Chain A 474 702 - -
Pral3201g00087 818 Gene3D C2 domain 34 167 IPR035892 -
Pral3201g00087 818 CDD C2_plant_PLD 4 157 - -
Pral3201g00087 818 FunFam Phospholipase D 474 707 - -
Pral3201g00087 818 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 56 159 IPR035892 -
Pral3201g00087 818 Pfam C2 domain 50 136 IPR000008 -
Pral3201g00087 818 Gene3D Endonuclease Chain A 208 449 - -
Pral3201g00087 818 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 333 371 IPR001736 GO:0003824
Pral3201g00087 818 PANTHER PHOSPHOLIPASE D 3 809 IPR015679 -
Pral3201g00087 818 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Pral3201g00087 818 Pfam Phospholipase D C terminal 736 809 IPR024632 -
Pral3201g00087 818 SMART pld_4 333 371 IPR001736 GO:0003824
Pral3201g00087 818 SMART pld_4 661 688 IPR001736 GO:0003824
Pral3201g00087 818 PIRSF PLD_plant 1 818 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pral3201g00087 818 SMART C2_3c 8 133 IPR000008 -
Pral3201g00087 818 FunFam Phospholipase D delta 210 446 - -
Pral3201g00087 818 SUPERFAMILY Phospholipase D/nuclease 505 736 - -
Pral3201g00087 818 Pfam Phospholipase D Active site motif 333 371 IPR001736 GO:0003824
Pral3201g00087 818 Pfam Phospholipase D Active site motif 662 688 IPR001736 GO:0003824
Pral3201g00087 818 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 661 688 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3201g00087 Pral-Chr3201 401883 406124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3201g00087 3 818 Phospholipase D Gene Family (Wang group) AT3G15730 64.477 0.0 1096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3201g00087 K01115 - gmx:100791688 1180.62