Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3201g00048 ATGCTGCAGGAACGCACGAGTCCACGTGGTTGTGGCGCGCTCAGCCCCATTATAACATATTCACTCTCCGCTCTCCACAATTCTCTGTGCTTCTGCGCGCACACAGAACGAGTGAGAAAGACAGTTAGGAGAAGCACTGCAATCACAGACTATGAGAAAAGGTTGAGCCTTTGTACAACTCAGAGCCCTTTTCCGTATCAATTTCGAAGGCCTCCACCAAGTCTCACCATGTTTTCTTCTTGGCACGTTGAAGACTCCATAAAAATGAAGCTTCTTTTGTTGCTTCTTCTATTGTTTCCTTTTCTTCAAGGCCCCATGTCGGTTTCTGTTGCCGCCGAACCTCTCCTTTTGTCACCTACAGTCCCACCACCTGTGTCCCCAGCATCAATGGCGGCATTTTCTCCAGATATTCAGGTGGAGAATGAACGGAACGGAACAGATTCAGACATGAAGGTGGTAATAGCTCTCGTCGTAGCCGGCACTGCACTTGGTGCAGTCATTTTGTCCTTCTTATGCCTCTGCGTTTGTTACGAGAAGTCCCCGTCCAAATTAAAGAGGAAAGATGTCCAAAGTTCAGATGCGGAGAAAGGGCTTGCAAGAACCCCATTTCTGAGAAAATTTAGTTCACTCAAGATGAATGGTGAGAAGGGGTCTGTTTCCATAGTATTTGATCATAAGACGATAGAAAAAGCGACGAACAATTTTCTGGAAAGTAATATATTGGGAGAGGGCGGATTTGGATGCGTTTACAAGGCTCGATTACACAATAACTTGGATGTTGCCGTCAAAAAATTGCACTGTGAAAGTCAGGACGCTCAGAGAGAATTTCAGAACGAGGTGGACTTGTTATGTAAAATTCAGCATCCAAATATAATCTCTTTGCTGGGTTGCAGCAGTAATGGCGACACGAAGTTTATTGTCTATGAATTAATGCGAAATGGATCATTAGAGACTCAGTTACATGGACCATATCATGGCTCGGCGTTGACTTGGCACATGAGGATGAAGATTGCTCTCGACACAGCGAGAGGATTAGAATATCTGCATGAAATCTGTAACCCCGCAGTGATCCATAGAGATCTGAAATCATCTAATATTCTTTTAGACGCAAATTTCAATGCCAAGCTGTGTGATTTCGGTCTTGCCGTAGCTGATGGGTCCCAATACAAGAATGACATAAAACTCTCAGGCACATTGGGATATGTAGCTCCCGAGTATATATTAGATGCAAACCAGATCCAATATATTGTTTCTTTTGGACGCATGAGGACTTTAATGATGTCATGA 1287 0.4398 MLQERTSPRGCGALSPIITYSLSALHNSLCFCAHTERVRKTVRRSTAITDYEKRLSLCTTQSPFPYQFRRPPPSLTMFSSWHVEDSIKMKLLLLLLLLFPFLQGPMSVSVAAEPLLLSPTVPPPVSPASMAAFSPDIQVENERNGTDSDMKVVIALVVAGTALGAVILSFLCLCVCYEKSPSKLKRKDVQSSDAEKGLARTPFLRKFSSLKMNGEKGSVSIVFDHKTIEKATNNFLESNILGEGGFGCVYKARLHNNLDVAVKKLHCESQDAQREFQNEVDLLCKIQHPNIISLLGCSSNGDTKFIVYELMRNGSLETQLHGPYHGSALTWHMRMKIALDTARGLEYLHEICNPAVIHRDLKSSNILLDANFNAKLCDFGLAVADGSQYKNDIKLSGTLGYVAPEYILDANQIQYIVSFGRMRTLMMS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3201g00048 428 FunFam Protein kinase superfamily protein 201 310 - -
Pral3201g00048 428 SMART serkin_6 235 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3201g00048 428 FunFam Os07g0541700 protein 311 398 - -
Pral3201g00048 428 SUPERFAMILY Protein kinase-like (PK-like) 217 411 IPR011009 -
Pral3201g00048 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672|GO:0006468
Pral3201g00048 428 Pfam Protein kinase domain 238 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3201g00048 428 Gene3D Phosphorylase Kinase; domain 1 203 310 - -
Pral3201g00048 428 ProSitePatterns Protein kinases ATP-binding region signature. 241 264 IPR017441 GO:0005524
Pral3201g00048 428 PANTHER OS01G0750732 PROTEIN 52 407 - -
Pral3201g00048 428 ProSiteProfiles Protein kinase domain profile. 235 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3201g00048 428 Gene3D Transferase(Phosphotransferase) domain 1 311 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3201g00048 Pral-Chr3201 212663 215441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3201g00048 118 393 Receptor kinase-like Gene Family AT1G80640 45.035 2.31e-70 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pral3201g00048 Pkinase 1.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3201g00048 - - pcin:129318734 450.669