Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3201g00047 ATGCTGCAGGAACGCACGAGTCCACGTGGTTGTGGCGCGCTCAGCCCCATTATAACATATTCACTCTCCGCTCTCCACAATTCTCTGTGCTTCTGCGCGCACACAGAACGAGTGAGAAAGACAGTTAGGAGAAGCACTGCAATCACAGACTATGAGAAAAGGTTGAGCCTTTGTACAACTCAGAGCCCTTTTCCGTATCAATTTCGAAGGCCTCCACCAAGTCTCACCATGTTTTCTTCTTGGCACGTTGAAGACTCCATAAAAATGAAGCTTCTTTTGTTGCTTCTTCTATTGTTTCCTTTTCTTCAAGGCCCCATGTCGGTTTCTGTTGCCGCCGAACCTCTCCTTTTGTCACCTACAGTCCCACCACCTGTGTCCCCAGCATCAATGGCGGCATTTTCTCCAGATATTCAGGTGGAGAATGAACGGAACGGAACAGATTCAGACATGAAGGTGGTAATAGCTCTCGTCGTAGCCGGCACTGCACTTGGTGCAGTCATTTTGTCCTTCTTATGCCTCTGCGTTTGTTACGAGAAGTCCCCGTCCAAATTAAAGAGGAAAGATGTCCAAAGTTCAGATGCGGAGAAAGGGCTTGCAAGAACCCCATTTCTGAGAAAATTTAGTTCACTCAAGATGAATGGTGAGAAGGGGTCTGTTTCCATAGTATTTGATCATAAGACGATAGAAAAAGCGACGAACAATTTTCTGGAAAGTAATATATTGGGAGAGGGCGGATTTGGATGCGTTTACAAGGCTCGATTACACAATAACTTGGATGTTGCCGTCAAAAAATTGCACTGTGAAAGTCAGGACGCTCAGAGAGAATTTCAGAACGAGGTGGACTTGTTATGTAAAATTCAGCATCCAAATATAATCTCTTTGCTGGGTTGCAGCAGTAATGGCGACACGAAGTTTATTGTCTATGAATTAATGCGAAATGGATCATTAGAGACTCAGTTACATGGACCATATCATGGCTCGGCGTTGACTTGGCACATGAGGATGAAGATTGCTCTCGACACAGCGAGAGGATTAGAATATCTGCATGAAATCTGTAACCCCGCAGTGATCCATAGAGATCTGAAATCATCTAATATTCTTTTAGACGCAAATTTCAATGCCAAGCTGTGTGATTTCGGTCTTGCCGTAGCTGATGGGTCCCAATACAAGAATGACATAAAACTCTCAGGCACATTGGGATATGTAGCTCCCGAGTATATATTAGATGGTAAATTAACTGATAAAAGCGATGTGTATGCATTCGGAGTGGTGCTTCTAGAACTGGTGTTGGGGAGGAAGCCAGTGGAAAAGCTAACACCAACACAGTGCCGGTCTCTTGTCACATGGGCGATGCCACAGCTCAGCGACAGATCCAAGCTTCCCAACATTGTGGATCCCATAATCAAGAATACAATGGATCTCAAGCATTTGTGTCAGGTTGCAGCTGTGGCGGCGCTGTGCGTGCAACCAGAACCGAGTTATCGTCCGCTGATTACAGATGTGCTCCATTCTCTCATCCCTCTTGTGCCTGTAGAGCTTGGAGGAACACTCAGAATTCCACAATCGTCACAGCCTCTTTGTTCAACATAA 1590 0.4535 MLQERTSPRGCGALSPIITYSLSALHNSLCFCAHTERVRKTVRRSTAITDYEKRLSLCTTQSPFPYQFRRPPPSLTMFSSWHVEDSIKMKLLLLLLLLFPFLQGPMSVSVAAEPLLLSPTVPPPVSPASMAAFSPDIQVENERNGTDSDMKVVIALVVAGTALGAVILSFLCLCVCYEKSPSKLKRKDVQSSDAEKGLARTPFLRKFSSLKMNGEKGSVSIVFDHKTIEKATNNFLESNILGEGGFGCVYKARLHNNLDVAVKKLHCESQDAQREFQNEVDLLCKIQHPNIISLLGCSSNGDTKFIVYELMRNGSLETQLHGPYHGSALTWHMRMKIALDTARGLEYLHEICNPAVIHRDLKSSNILLDANFNAKLCDFGLAVADGSQYKNDIKLSGTLGYVAPEYILDGKLTDKSDVYAFGVVLLELVLGRKPVEKLTPTQCRSLVTWAMPQLSDRSKLPNIVDPIIKNTMDLKHLCQVAAVAALCVQPEPSYRPLITDVLHSLIPLVPVELGGTLRIPQSSQPLCST 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3201g00047 529 Pfam Protein tyrosine and serine/threonine kinase 239 473 IPR001245 GO:0004672|GO:0006468
Pral3201g00047 529 CDD STKc_IRAK 241 508 - -
Pral3201g00047 529 PANTHER OS01G0750732 PROTEIN 54 508 - -
Pral3201g00047 529 SMART serkin_6 235 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3201g00047 529 SUPERFAMILY Protein kinase-like (PK-like) 218 505 IPR011009 -
Pral3201g00047 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672|GO:0006468
Pral3201g00047 529 ProSiteProfiles Protein kinase domain profile. 235 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3201g00047 529 ProSitePatterns Protein kinases ATP-binding region signature. 241 264 IPR017441 GO:0005524
Pral3201g00047 529 Gene3D Transferase(Phosphotransferase) domain 1 311 510 - -
Pral3201g00047 529 FunFam probable receptor-like protein kinase At1g80640 311 510 - -
Pral3201g00047 529 FunFam Protein kinase superfamily protein 201 310 - -
Pral3201g00047 529 Gene3D Phosphorylase Kinase; domain 1 204 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3201g00047 Pral-Chr3201 211982 215441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3201g00047 152 509 Receptor kinase-like Gene Family AT3G58690 43.681 5.01e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pral3201g00047 PK_Tyr_Ser-Thr 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3201g00047 - - pcin:129318734 649.818