Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3201g00043 ATGGCCAGACCACAACAACGGTATCGAGGCGTCCGACAAAGGCATTGGGGGTCTTGGGTCTCTGAAATCCGCCACCCTCTATTGAAGACGAGGATATGGCTTGGTACATTTGAAACTGCAGAAGATGCAGCCAGAGCATACGATGAAGCAGCGAGGCTGATGTGTGGTCCGAGAGCAAGAACCAATTTCCCTTACAACCCCAATGCGTCTCAATCATCATCTTCTAAGCTTCTCTCCGCAACTTTGACCGCTAAACTGCATAGATGTTATATGGCTTCGCTTCAAATGACAAGACCTACAGTGCCGGAACCTCTGCGAGTAACTTCGCCAAATGTAGTGTCCACGAGTACAAGCAACTCGTCCACTGTGAAAAGGAGAGAGAACAATATTACAATGTTGGAAGGGAAGACAGCCAAGGAGGAGAAGGAAGAGACTGAAGAATCAGAGGCAAAGTGGGGTGTGAAGAAGGTGAAGGTGGAAAGTGGTGAGCAATTCAAGCCTCTTGAAGAGGATCATATAGAGCAAATGATTGAAGAGCTTCTTGATTATGGGTCTATTGAGCTCTGTTCTGTCATGCCATCTCAGTAA 588 0.4711 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQMTRPTVPEPLRVTSPNVVSTSTSNSSTVKRRENNITMLEGKTAKEEKEETEESEAKWGVKKVKVESGEQFKPLEEDHIEQMIEELLDYGSIELCSVMPSQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3201g00043 195 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Pral3201g00043 195 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Pral3201g00043 195 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Pral3201g00043 195 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Pral3201g00043 195 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Pral3201g00043 195 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Pral3201g00043 195 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Pral3201g00043 195 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Pral3201g00043 195 MobiDBLite consensus disorder prediction 102 123 - -
Pral3201g00043 195 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Pral3201g00043 195 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 138 - -
Pral3201g00043 195 MobiDBLite consensus disorder prediction 101 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3201g00043 Pral-Chr3201 199498 200648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3201g00043 1 195 AP2-EREBP Transcription Factor Family AT5G25190 66.154 3.89e-84 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral3201g00043 AP2 8.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3201g00043 - - gmx:100819158 257.299