Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3201g00040 ATGAGAAAGTTAGTACTATCTGCCATGGAACGAGTTTGTAATAACCCCGGCCTACTCTTCGCTGGAGAGGTTCGTCCCAGTCCAAGTAGTCCATTGCAGAGCCAACAGGAAAAGAAACACCTATCTGTTGAGGAGGAGGAAGAAGAAGAAGAAGATGCAAAGACAGATTCTTTGTTAGATCTGAACGTGAACGGCGATGATTTTGCTGCCGGGTGCAATCCAGAACTCCATCTCATAACCAATTTGGATGTAGATAGGGAAAAATCCAAAAGTTCAGAAAATTCTGGAGCTTTAGAGGCAGAGCCACGAGTATTTTCTTGCAAGTACTGTCAGAGGAAGTTTTACAGTTCGCAAGCGCTTGGAGGACACCAAAATGCGCACAAGAGGGAGAGGTTAATAGCGAAGAGAGGACAGAGGGAGATAATGGCCTCAGCTACAGACTTTGGGCTTCCTTTTCTGCATCATAATAACAGGTATACAAGTATGGCGTCTCTGCCCCTCCACGGTACTGCCGCTAATAAACCTCTTGGAATTCAGGCGCACGCCATGATTCACAAGCGTTCTCATATTTCTTCTAATTACGGGTTTGGAAACAGCCACGGAAATCATGGCTGGTCAAGACCCCTAATTGATCAGAAACCCAGAGTAGGCAAGCTAGAGATGGCTAATTTTCATAGAACAACAACGTTGGGCTTGTCATCACGAGGTAGTGTAGGAAGGTTTGAAACGGCAAAGACGACGAAGTTGGGTTCTGCAGTTAGTGATCAGATCGCTGGGTATTTGGCAACTGGAACTCTATTGAAGACTGATCAAGAAGAAACAAAGCACCTTGATTTATCCCTCAAGCTCTAA 852 0.4519 MRKLVLSAMERVCNNPGLLFAGEVRPSPSSPLQSQQEKKHLSVEEEEEEEEDAKTDSLLDLNVNGDDFAAGCNPELHLITNLDVDREKSKSSENSGALEAEPRVFSCKYCQRKFYSSQALGGHQNAHKRERLIAKRGQREIMASATDFGLPFLHHNNRYTSMASLPLHGTAANKPLGIQAHAMIHKRSHISSNYGFGNSHGNHGWSRPLIDQKPRVGKLEMANFHRTTTLGLSSRGSVGRFETAKTTKLGSAVSDQIAGYLATGTLLKTDQEETKHLDLSLKL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3201g00040 283 ProSiteProfiles Zinc finger C2H2 type domain profile. 105 132 IPR013087 -
Pral3201g00040 283 SUPERFAMILY beta-beta-alpha zinc fingers 102 132 IPR036236 -
Pral3201g00040 283 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 33 283 IPR044246 GO:0009788
Pral3201g00040 283 MobiDBLite consensus disorder prediction 24 57 - -
Pral3201g00040 283 ProSitePatterns Zinc finger C2H2 type domain signature. 107 127 IPR013087 -
Pral3201g00040 283 FunFam Zinc finger protein 2 83 150 - -
Pral3201g00040 283 Gene3D Classic Zinc Finger 85 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3201g00040 Pral-Chr3201 182047 183870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3201g00040 44 283 C2H2 Transcription Factor Family AT5G10970 37.891 5.84e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral3201g00040 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3201g00040 - - gmx:100819663 295.049