Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3201g00038 ATGACTGTGGAGACCAGAATGGATGATCCCAGAGACCAGTTTCCTGTAGGGATGCGTGTTCTTGCCGTTGACGATGACCCAACTTGCCTCTTCGTGTTGGAAACTCTTCTTCGACGATGCCAATATAACGTGACGACAACTAGTCAGGCAATAACAGCATTGAAGCTGTTGAGAGAAAACAAAAACAGGTTTGACCTGGTTATCAGTGATGTTCATATGCCAGACATGGATGGCTTTAAACTACTCGAGCATGTAGGACTTGAGATGGACTTACCAGTCATAATGTTGTCAGCATATGGTGACCCAAAGCTAGTGATGAAGGGAATTACTCATGGAGCATGTGATTATCTGTTGAAACCTGTTCGTATGGAAGAGCTAAAGAACATTTGGCAGCATGTGATCAGGAGGAGGAAGTTTGACTCTAAGGAGCAGAACAATCCCCACAACCAAGACAAGCCTCATGCAGGTAGCGGCAGCAGTCTAGGATCAGCAGGAACATACCATATAGATCAAAAGATGCCCAAGAAAAGGAAGGATCAGAATGATGATGAGGAGGACGTTGATGAGGACCCGTCGACCCAGAAGAAGCCTCGGGTTGTCTGGACAGTTGAGCTGCATCGCAAGTTTGTTGCTGCTGTTAATCAGTTGGGCATTGACAAGGCTGTACCTAAAAAGATTCTTGATTTGATGAATGTTGAGAAGCTTACTAGGGAGAATGTGGCTAGCCATCTCCAGAAATATAGGCTCTATCTGAAAAGAATCAGTTGTGTAGCGAACCAACAGGCTAATCTGGTGGCAGCCTTAGGTACTGCAGATCAATCGTTTTGGAGAATGGGCTCTTTGAGTGGGCTCAGCCATTTGCAAACATTGAGTGCTCCTGGACAGTTTCAGAACAATGTTTTCAGATCCCTCCCATCTATTAGGGCAATTGGTCGATTCAACTCTCCTGCTGGCCTGGGCGTGCATGGACTGCCTTCTTCAAGAAATATTCAGTTTGGCTGTGCGCAGAACTTAAACAATTCTATGAATGACCCACTCAAGTTCCAGTCAACCATTGTTCATGGTAACCAAAATGGCAATGCAGTTCGGGGAACAATAGGGTATACCGAGAGTAATCAATTACAACACCATAAGCATAAAAGCATTAGTTCTTCTCATGACATGACCAATGCTATTGATGTTGATGATAAAATAATGTTAGCCATCTCTAGTCAACCACTTGATCCAACACAAATAGTAACTGCTAGCTGCCCACTCACCCCACTTCAGAGTGTAGAAGACAACTCCTTTATGGTAGCAGCACATCCTGAAAACACACAAGGGGGCAGAGCATATGAGAATTTATCTTCAATAGATGCTCAACGTTCAGAAATTTCTTGCTCTTTGCTGGATCATAGGTGTTGTGGTGATGATTGGTCCGATGGTGTGCAGTCATCTGAAATCCTGCCAAATTCTTACCCACCAACTGGGTGTTCTAGACCAATGGTTGTATCTCCAACGGAGAACTTGACTGCTACACCGTTGCGTGTTGGGAATCCAAGTGATGCTTCATCCGTCACTTTCATGTACAGCCAACCCCAAGATGTAACAGCAAATTCGAATTCCCAAGGAGACATTTTTGCTAATACTTCCGGGCACATAAGCAGTAACGTACCCTTTCAAGGGTGGGATGACCGAAGTCAGGATTCTGCTTACCGTTCAAATGTTATTTGTAGCTCTGCAAACTCTCTGATTCCTGTAAATGGTAGTGTTAGTGGACCAGCTAGTCCTTCACCAACAGACCCAGCCTTGTGCAGAAACTTGGTCTTCAATTGTGGTAATCCCACACAAACTAAGCATCATGGAGTGGCAAAACTAGCTGAAGAGATCCTGTTGAGACAAGGTCAAGGGTATCTCATAGACGCGCAGAAGGCGCAACAGAGTCACATCAATAGCAATCTTGGTTCACTGGATGATTTAGTCGGTTCAATGATGAAACAGGATGAAGACAAGGTGAAATTATTGAATGGAGACTTAATATGTAATAATTACACCGTGGGGACATCTATGTGA 2052 0.4425 MTVETRMDDPRDQFPVGMRVLAVDDDPTCLFVLETLLRRCQYNVTTTSQAITALKLLRENKNRFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDPKLVMKGITHGACDYLLKPVRMEELKNIWQHVIRRRKFDSKEQNNPHNQDKPHAGSGSSLGSAGTYHIDQKMPKKRKDQNDDEEDVDEDPSTQKKPRVVWTVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANLVAALGTADQSFWRMGSLSGLSHLQTLSAPGQFQNNVFRSLPSIRAIGRFNSPAGLGVHGLPSSRNIQFGCAQNLNNSMNDPLKFQSTIVHGNQNGNAVRGTIGYTESNQLQHHKHKSISSSHDMTNAIDVDDKIMLAISSQPLDPTQIVTASCPLTPLQSVEDNSFMVAAHPENTQGGRAYENLSSIDAQRSEISCSLLDHRCCGDDWSDGVQSSEILPNSYPPTGCSRPMVVSPTENLTATPLRVGNPSDASSVTFMYSQPQDVTANSNSQGDIFANTSGHISSNVPFQGWDDRSQDSAYRSNVICSSANSLIPVNGSVSGPASPSPTDPALCRNLVFNCGNPTQTKHHGVAKLAEEILLRQGQGYLIDAQKAQQSHINSNLGSLDDLVGSMMKQDEDKVKLLNGDLICNNYTVGTSM 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3201g00038 683 SUPERFAMILY CheY-like 17 142 IPR011006 -
Pral3201g00038 683 Gene3D - 192 255 - -
Pral3201g00038 683 CDD REC_typeB_ARR-like 20 134 - -
Pral3201g00038 683 SUPERFAMILY Homeodomain-like 193 253 IPR009057 -
Pral3201g00038 683 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Pral3201g00038 683 MobiDBLite consensus disorder prediction 150 166 - -
Pral3201g00038 683 MobiDBLite consensus disorder prediction 139 195 - -
Pral3201g00038 683 FunFam Two-component response regulator 192 255 - -
Pral3201g00038 683 Pfam Myb-like DNA-binding domain 198 248 IPR001005 -
Pral3201g00038 683 SMART REC_2 18 130 IPR001789 GO:0000160
Pral3201g00038 683 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 363 IPR045279 GO:0009736
Pral3201g00038 683 NCBIfam myb-like DNA-binding domain, SHAQKYF class 196 249 IPR006447 GO:0003677
Pral3201g00038 683 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 193 252 IPR017930 -
Pral3201g00038 683 Gene3D - 17 155 - -
Pral3201g00038 683 PIRSF RR_ARR_type-B 1 681 IPR017053 GO:0003677|GO:0003700|GO:0009736
Pral3201g00038 683 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3201g00038 Pral-Chr3201 168587 173186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3201g00038 1 672 Response Regulator Gene Family AT2G25180 41.752 1.25e-130 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pral3201g00038 Response_reg 1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3201g00038 K14491 - gmx:100809002 736.873