Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3201g00025 ATGGAGGAGAAAAGTACAGTGTTTGGCAAGTATGAAATAGGCAGGCTTCTGGGCAAAGGGACTTTCGCCAAGGTGTATCACGGCAAACAGATAGCCACCGGCGAAAGCGTGGCCATCAAAATCGTGAGAAAGGAGCAGGTCAGGAAGGAGGGCATGATGGAGCAGATCAAGCGCGAGATTTCCGTGATGCGATTGGTTCGTCACCCCAACGTGGTTGAGCTCAAAGAAGTGATGGCCACCAAGACGAAAATTTTCTTCGTCATGGAGTACGTCCGCGGCGGTGAGCTCTTCGCCAAGGTCGCCAGAGGCAAGCTCAAGGAAGATGTGGCTCGCAAGTATTTCCAACAGTTGATCAGCGCCGTCGATTTCTGTCACAGCAGAGGAGTTTCGCACCGGGATCTCAAGCCCGAAAATCTGTTGCTGGACGAGAACGAGAATCTCAAAATCTCCGACTTTGGCCTCTCGGCGTTGCCGGAACAGCTCCGTCACGACGGTCTCCTCCACACCCAGTGTGGTACTCCGGCATATGTGGCCCCCGAAGTGTTGAGAAAGAAAGGGTATGATGGGTCCAAGGCTGATATATGGTCGTGCGGTGTCATTCTGTACGCACTGCTCGCTGGGTTCCTTCCTTTCCAGAACGAGAACCTCATGAGCATGTATACCAAGGTTTTAAGAGCCGAATTCCAATACCCTCCATGGTTTTCTGCGGAATCGAGGAGATTGATTTCGAAAATCCTCGTGGCTGACCCGGAGAGACGGGCTACGATCCCAGCGATAATGCGGGTCACTTGGTTTCTGAAAGGTTTCTCGAAGCCATCTGCTTTTCAACTAGAGGAACCCGATGATAAGGAGCTGCAGAAATCAGAACTTGCAAACCCAAAATCTAAGCCTTCATCACCCCAGTTTTTCAATGCGTTCGATTTCATTTCGTCCATGTCTTCCGGGTTCGATCTGTCCGGGCTGTTCGAGAGCAAGAGGAGAACAGGGTCGATGTTCACATCCAAATGCTCTGCCACGGCAATCGTATCGAAGATTGTGACGGTGGCGAAAGGGCTGAGTTTCAGGGTAGGGAATGAGAAGGGATTCAAGATCAGGCTGCAGGGGCCGTCGGAGGGTAGGAAAGGGAGGCTGACCGTGACGGCGGAGGTGTTCGAGGTGGCACCGGAGGTGGCCGTGGTGGAGTTCTCAAAGAGCTCCGGCGATACGCTGGAATATGCAAAGTTTTGCGAGGAAGACGTTAGGCCGGCGCTGAAAGATATAGTTTGGACGTGGCAAGGCGACAGCCCGTGCAAGGGCAACATGGACGCCGGTTACGGAGAAGGATCTCGGGAACACGTAATCAGCAACGTAGCATAG 1356 0.5288 MEEKSTVFGKYEIGRLLGKGTFAKVYHGKQIATGESVAIKIVRKEQVRKEGMMEQIKREISVMRLVRHPNVVELKEVMATKTKIFFVMEYVRGGELFAKVARGKLKEDVARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENENLKISDFGLSALPEQLRHDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVILYALLAGFLPFQNENLMSMYTKVLRAEFQYPPWFSAESRRLISKILVADPERRATIPAIMRVTWFLKGFSKPSAFQLEEPDDKELQKSELANPKSKPSSPQFFNAFDFISSMSSGFDLSGLFESKRRTGSMFTSKCSATAIVSKIVTVAKGLSFRVGNEKGFKIRLQGPSEGRKGRLTVTAEVFEVAPEVAVVEFSKSSGDTLEYAKFCEEDVRPALKDIVWTWQGDSPCKGNMDAGYGEGSREHVISNVA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3201g00025 451 ProSitePatterns Protein kinases ATP-binding region signature. 17 44 IPR017441 GO:0005524
Pral3201g00025 451 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3201g00025 451 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3201g00025 451 FunFam Non-specific serine/threonine protein kinase 4 301 - -
Pral3201g00025 451 FunFam Non-specific serine/threonine protein kinase 298 422 - -
Pral3201g00025 451 ProSiteProfiles NAF domain profile. 298 323 IPR018451 GO:0007165
Pral3201g00025 451 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Pral3201g00025 451 CDD STKc_SnRK3 10 264 - -
Pral3201g00025 451 Gene3D Kinase associated domain 1, KA1 305 423 - -
Pral3201g00025 451 SUPERFAMILY Protein kinase-like (PK-like) 7 295 IPR011009 -
Pral3201g00025 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Pral3201g00025 451 Pfam NAF domain 300 356 IPR004041 GO:0007165
Pral3201g00025 451 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 418 - -
Pral3201g00025 451 CDD CIPK_C 304 418 - -
Pral3201g00025 451 Gene3D Transferase(Phosphotransferase) domain 1 1 304 - -
Pral3201g00025 451 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3201g00025 Pral-Chr3201 92021 93801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3201g00025 2 428 CBL-interacting serine-threonine protein kinases AT5G10930 69.195 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral3201g00025 Pkinase 1.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3201g00025 - - qsa:O6P43_015759 701.049